| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3828 |
|---|
| Symbol | |
|---|
| ID | 3369363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4557364 |
|---|
| End bp | 4558491 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637654185 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_236896 |
|---|
| Protein GI | 66047055 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3146] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.210412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0118616 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTTC ACGTAATCGA CAGCCTCGCC ACCGTTGCGC CTGCCCAGTG GGATGCGCTG
GTACCTGGCA ATCAGCCATT CCTGCGGCAT GCGTTTCTCA GCTCGCTGGA GGACAGCGGC
AGTCTCGGGC CACGATCGGG CTGGCGTGCC GAACATGTGC TGCACTACGA AAACGATCAG
TTGGTGGCGG CATTGCCAGC CTACCGAAAG TGGCATTCGT ATGGCGAGTA CGTGTTCGAT
CACGCCTGGG CAGACGCCTG CCGTCGCGCC GGCATCGCCT ATTACCCCAA GCTGCTGATC
GCCGTGCCGT TCAGCCCGGT CGGCGGTTCG CGGATTCTGT CCGCGACGCC TCAGGGTGGC
ATCGAGTTGC TCGGCGAGCT GCCGGCATAC CTGCAACGTG AGGGGCTGTC GAGCGCACAC
GTGAACTTTA CCGATCCGGC GGCCGATGCC TTGCTTGAAA CCCAGCCGGG CTGGTTGCAG
CGCATCGGTT GCCAGTTTCA CTGGCATAAC CGGGGTTACC GGGACTTTCA GGACTTTCTT
GACGCATTGA GTTCACGCAA GCGCAAACAG ATGCGCAAGG AACGTGAACA AGTGGCGGGG
CAGGGCATCG AGTTTGAATG GCTCGAGGGC GCGCAGATGA GCGAAGTGCT GTGGGACTTC
GTTTATGCGT GCTACTCCAA TACCTACGAG GTGCGTGGGC AGGCGCCTTA CCTGACGCGT
GAGTTCTTCA GCCTGTTGGC CGAGCGCATG CCCGAATCGA TCCGTGTGGT CATCGCGCTG
CAGGGCTCAC GGCCTGTGGC GATGGCCTTC AGCCTGATTG GCGATGACAG TTTCTATGGG
CGCTACTGGG GCTGCCTGGC CGAGTTTGAC CGGCTGCATT TCGAAACCTG TTTCTATCAA
GGTATGGACT ATGCCATCGC CCACGGCCTG CAACGATTCG ACGCCGGCGC GCAGGGCGAA
CACAAACTGA TCCGCGGCTT CGAACCGCAG ATCACCCGTT CGTGGCACTA CCTGATGCAC
CCAGGCCTGA AAGACGCGGT CAGCGAGTTT CTGGAGCAGG AGCGAGTCGG CGTACTGGCC
TATGCCGAGG AAGCGCGCAG CGCGCTGCCG TATCGGCAGG CGGAGTAA
|
|---|
| Protein sequence | MPVHVIDSLA TVAPAQWDAL VPGNQPFLRH AFLSSLEDSG SLGPRSGWRA EHVLHYENDQ
LVAALPAYRK WHSYGEYVFD HAWADACRRA GIAYYPKLLI AVPFSPVGGS RILSATPQGG
IELLGELPAY LQREGLSSAH VNFTDPAADA LLETQPGWLQ RIGCQFHWHN RGYRDFQDFL
DALSSRKRKQ MRKEREQVAG QGIEFEWLEG AQMSEVLWDF VYACYSNTYE VRGQAPYLTR
EFFSLLAERM PESIRVVIAL QGSRPVAMAF SLIGDDSFYG RYWGCLAEFD RLHFETCFYQ
GMDYAIAHGL QRFDAGAQGE HKLIRGFEPQ ITRSWHYLMH PGLKDAVSEF LEQERVGVLA
YAEEARSALP YRQAE
|
|---|
| |