| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3810 |
|---|
| Symbol | |
|---|
| ID | 3369345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4531582 |
|---|
| End bp | 4532403 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637654168 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_236879 |
|---|
| Protein GI | 66047038 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000660644 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGGCG TCAGTGCGAC CGGCTTTCAT TGCCACCAAG CTCGCTGTGC AGTTAATTGC
CCTCAACGAG GTTTAAGCGA CGCAGCATTG CTCGTCCACA TTCGCGCCGC TCATGCCCGC
AGTCGTGGCA GCTACGGCTG GCCCAGGATC TGGCACGGTT TGCTGGCTGA CGGCGTTCGC
GTCGGCAAAG AGCGTGTGCA AAAGCTGATG CAGCTTCATG GTATTTGCGG CAAGGGCAAA
CGACGTTTCA AAGTGACCAC TGATAGCGCT CATGACTTAC CCATTTCGGA GAACCTGCTG
GATCGCCAGT TCGCCGTGAT GGAGCCTGAC AGAGCTTGGG TGGGCGACAT CACCTACATC
CCGACAGATG AGGGCTGGCT GTTTCTGGCG GTAGTGGTAG ACCTGTTCAG TCGCCAGATC
GTGGGCTGGT CGATGGACGA GCGCATGAAA AGCAGCCTGG TGATTGATGC GTTGCGCATG
GCCTGGTTCA AGCGTCATCC ACATAAGGCC TCCGGACTGC TGTTTCATAG TGATCGCGGG
AGCCAGTACG CCAGCTTTGA TTTTCGTCAT GTCCTTCAGG GCTACGGGAT TGTCAGCTCG
ATGAGTCGAC GGGGCAATTG CTGGGATAAC GCGTGCAGCG AGACCGTGTT CGGCTCGTTG
AAGGTGGAAC GTCTGCATGG CTTGAAATTC AAAACCCGAC GCGCTGCCAA GGACGAGGTC
ATTAACTGGC TGCTGTGGTA CAACCAGGAG CGCCTGCACT CGACGCTTCA TTACGTAAGT
CCGATGCAAT ACGAGCAGAA CTGGCAAAGG CAACAACCTT AG
|
|---|
| Protein sequence | MLGVSATGFH CHQARCAVNC PQRGLSDAAL LVHIRAAHAR SRGSYGWPRI WHGLLADGVR
VGKERVQKLM QLHGICGKGK RRFKVTTDSA HDLPISENLL DRQFAVMEPD RAWVGDITYI
PTDEGWLFLA VVVDLFSRQI VGWSMDERMK SSLVIDALRM AWFKRHPHKA SGLLFHSDRG
SQYASFDFRH VLQGYGIVSS MSRRGNCWDN ACSETVFGSL KVERLHGLKF KTRRAAKDEV
INWLLWYNQE RLHSTLHYVS PMQYEQNWQR QQP
|
|---|
| |