Gene Psyr_3809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3809 
Symbol 
ID3369344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4529589 
End bp4531439 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content43% 
IMG OID637654167 
Producthypothetical protein 
Protein accessionYP_236878 
Protein GI66047037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000888518 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGATTCG GAATAGATAC TATACGCTTG TGGTCACATA AAGGTGAAAC ACGAGATATA 
ATTTTTGAAC GCGATAAAAT CAACGTATTA AGTGGCCATA GCAGTCGAGG AAAAACAGCT
CTTCTTCACA TCATCGATTA CTGCCTATTA TCGAGCAGTC ATAAAATCCC TCATGATGTA
ATCAATGATA CGGTAGCGTG GTACGGAATA AAATTTTATA TAAATGGCAA AGACTTGGCC
ATTGCTCGAA TGAGCCCTAA TGAGCAGACA GTTTCTGACG AATTATATTT TTCAAGTATA
GGTACCTTAC CAGCAGAGCC TTTCTCAAAT TCAAATAGTG ATGATATCAA AGCTGTCCTG
CAAAGCGAGT TCAGCTTAGA TAGCAGCGTG ATTCTCTATG GAGGTCGCGG CGTCAGATAT
GGAACTCAAG TATCTTTTCG ATATTTCCTA ATGTTCAATA CAATTTCGGA TGACATTATC
ACCAACACAG CAGCATATTT TGACCATCAG CAAGAAGATC GATACCGTGT TGCACTGCCC
CGCGTCTTGG ATCTTGGATT GGGAATAGAT AGTTTGAGAA ATATCGAGTT GCGCGAGCAA
CGTGATGGAC TCAAACGCGA GATAATAAGC CTGGAAAAAA AGAAAGCAGC CATCGGTACT
GGACGACATT TATTTGAGAG TGAAGCGAGG AAACTTGCGG CTACCGCTGC GGAATATGGC
CTGATTGAGA AAGTCCCAAA GGAAGTGACG ATTGACTTTC TCCGAGAGGT TGTTAAGGAT
GTACCAATCC CAGAAGCTTC CGGAGAGGAT GCAAAACGTC TTTCCAATGC TCGCGCAAAA
TTGTTCGAAA TCAATCGCAG GATGCGAAGG CTCCGCGAGT TCTCCGACGA GCACAAACAG
TACAAGTTAA CTTTAAAGGC GACTTTGGAC AGTTTGAAAC CACTCGATAC ACTTTTGAAG
CACTCGACAG AGCTGCTGAG GACAGAAATT TTCGACGATC TAATCGACAG TCTAAATGTA
GATCTTCGCG TATTAAAATC AGCCACAGCA GCCCGTCATC CTGTTGATAC CCAAGTCACC
AAAATGATGG ATGAACTGCA GAAGGAAAAA ACCGAACAGG AGAAAACTAT AGAGTCGCTG
CCAAAAGCGC AAAAATCATT TCAGGATACT ATTCAGTTAG TAAGATTTGT GACGCGAATC
CAGACGAAGC TAGAGACCTA CAGCGCAGTT GCGTCAGAAG GGCCTGAAAA TTACGACAGC
CAAATAAATA AGCTCAACGC ACAGCTTAAT CAATTAAAAG TTGAAGATGT TGCCAATCTT
CGTGATGGAG TTATTGGACA GATCAATGAC GTCTCACTTT CGCTACTTAG CGAAGCAGGT
GGGGCGATGA GCAACTATGC CAGCTTCGTG ACATCGTTCA ATTATGAAGC GCGCAAATTA
CAACTAAGAA GAAAAAACTC ATCGTTCATT GAAAATGTCG GCAGCAGTTC AAACCACATG
TTTCTACATT TATTTATGTT TTTAGCTATA CACAAGGTAG CGATAGATAG AGGGGGTAGG
TTCGTACCCG CCTTCCTATT CATCGACCAA CCGAGTCGTC CTTACTATGG TGAAGAAAAG
ATCATGGACG AGATCAGCCT AAAGGACTCA GATCAGGCTA AAGTTAGTCA GGCATTCGGA
CTTCTTAGCA ACTTTGTTTC ACGTATGAAA AAAGATCACG ATGCTGATTT CCAAATGATC
GTTCTTGAAC ACGTTCCTGT AGACCTGTTC AAGAATCTTC CTAATGTAAA GGTACTGCCC
GAATTTCGTG GTGCTAACGC ACTTATTCCT ATGCATTGGT TCGAGCCTTG A
 
Protein sequence
MRFGIDTIRL WSHKGETRDI IFERDKINVL SGHSSRGKTA LLHIIDYCLL SSSHKIPHDV 
INDTVAWYGI KFYINGKDLA IARMSPNEQT VSDELYFSSI GTLPAEPFSN SNSDDIKAVL
QSEFSLDSSV ILYGGRGVRY GTQVSFRYFL MFNTISDDII TNTAAYFDHQ QEDRYRVALP
RVLDLGLGID SLRNIELREQ RDGLKREIIS LEKKKAAIGT GRHLFESEAR KLAATAAEYG
LIEKVPKEVT IDFLREVVKD VPIPEASGED AKRLSNARAK LFEINRRMRR LREFSDEHKQ
YKLTLKATLD SLKPLDTLLK HSTELLRTEI FDDLIDSLNV DLRVLKSATA ARHPVDTQVT
KMMDELQKEK TEQEKTIESL PKAQKSFQDT IQLVRFVTRI QTKLETYSAV ASEGPENYDS
QINKLNAQLN QLKVEDVANL RDGVIGQIND VSLSLLSEAG GAMSNYASFV TSFNYEARKL
QLRRKNSSFI ENVGSSSNHM FLHLFMFLAI HKVAIDRGGR FVPAFLFIDQ PSRPYYGEEK
IMDEISLKDS DQAKVSQAFG LLSNFVSRMK KDHDADFQMI VLEHVPVDLF KNLPNVKVLP
EFRGANALIP MHWFEP