Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3809 |
Symbol | |
ID | 3369344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4529589 |
End bp | 4531439 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637654167 |
Product | hypothetical protein |
Protein accession | YP_236878 |
Protein GI | 66047037 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000888518 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGATTCG GAATAGATAC TATACGCTTG TGGTCACATA AAGGTGAAAC ACGAGATATA ATTTTTGAAC GCGATAAAAT CAACGTATTA AGTGGCCATA GCAGTCGAGG AAAAACAGCT CTTCTTCACA TCATCGATTA CTGCCTATTA TCGAGCAGTC ATAAAATCCC TCATGATGTA ATCAATGATA CGGTAGCGTG GTACGGAATA AAATTTTATA TAAATGGCAA AGACTTGGCC ATTGCTCGAA TGAGCCCTAA TGAGCAGACA GTTTCTGACG AATTATATTT TTCAAGTATA GGTACCTTAC CAGCAGAGCC TTTCTCAAAT TCAAATAGTG ATGATATCAA AGCTGTCCTG CAAAGCGAGT TCAGCTTAGA TAGCAGCGTG ATTCTCTATG GAGGTCGCGG CGTCAGATAT GGAACTCAAG TATCTTTTCG ATATTTCCTA ATGTTCAATA CAATTTCGGA TGACATTATC ACCAACACAG CAGCATATTT TGACCATCAG CAAGAAGATC GATACCGTGT TGCACTGCCC CGCGTCTTGG ATCTTGGATT GGGAATAGAT AGTTTGAGAA ATATCGAGTT GCGCGAGCAA CGTGATGGAC TCAAACGCGA GATAATAAGC CTGGAAAAAA AGAAAGCAGC CATCGGTACT GGACGACATT TATTTGAGAG TGAAGCGAGG AAACTTGCGG CTACCGCTGC GGAATATGGC CTGATTGAGA AAGTCCCAAA GGAAGTGACG ATTGACTTTC TCCGAGAGGT TGTTAAGGAT GTACCAATCC CAGAAGCTTC CGGAGAGGAT GCAAAACGTC TTTCCAATGC TCGCGCAAAA TTGTTCGAAA TCAATCGCAG GATGCGAAGG CTCCGCGAGT TCTCCGACGA GCACAAACAG TACAAGTTAA CTTTAAAGGC GACTTTGGAC AGTTTGAAAC CACTCGATAC ACTTTTGAAG CACTCGACAG AGCTGCTGAG GACAGAAATT TTCGACGATC TAATCGACAG TCTAAATGTA GATCTTCGCG TATTAAAATC AGCCACAGCA GCCCGTCATC CTGTTGATAC CCAAGTCACC AAAATGATGG ATGAACTGCA GAAGGAAAAA ACCGAACAGG AGAAAACTAT AGAGTCGCTG CCAAAAGCGC AAAAATCATT TCAGGATACT ATTCAGTTAG TAAGATTTGT GACGCGAATC CAGACGAAGC TAGAGACCTA CAGCGCAGTT GCGTCAGAAG GGCCTGAAAA TTACGACAGC CAAATAAATA AGCTCAACGC ACAGCTTAAT CAATTAAAAG TTGAAGATGT TGCCAATCTT CGTGATGGAG TTATTGGACA GATCAATGAC GTCTCACTTT CGCTACTTAG CGAAGCAGGT GGGGCGATGA GCAACTATGC CAGCTTCGTG ACATCGTTCA ATTATGAAGC GCGCAAATTA CAACTAAGAA GAAAAAACTC ATCGTTCATT GAAAATGTCG GCAGCAGTTC AAACCACATG TTTCTACATT TATTTATGTT TTTAGCTATA CACAAGGTAG CGATAGATAG AGGGGGTAGG TTCGTACCCG CCTTCCTATT CATCGACCAA CCGAGTCGTC CTTACTATGG TGAAGAAAAG ATCATGGACG AGATCAGCCT AAAGGACTCA GATCAGGCTA AAGTTAGTCA GGCATTCGGA CTTCTTAGCA ACTTTGTTTC ACGTATGAAA AAAGATCACG ATGCTGATTT CCAAATGATC GTTCTTGAAC ACGTTCCTGT AGACCTGTTC AAGAATCTTC CTAATGTAAA GGTACTGCCC GAATTTCGTG GTGCTAACGC ACTTATTCCT ATGCATTGGT TCGAGCCTTG A
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Protein sequence | MRFGIDTIRL WSHKGETRDI IFERDKINVL SGHSSRGKTA LLHIIDYCLL SSSHKIPHDV INDTVAWYGI KFYINGKDLA IARMSPNEQT VSDELYFSSI GTLPAEPFSN SNSDDIKAVL QSEFSLDSSV ILYGGRGVRY GTQVSFRYFL MFNTISDDII TNTAAYFDHQ QEDRYRVALP RVLDLGLGID SLRNIELREQ RDGLKREIIS LEKKKAAIGT GRHLFESEAR KLAATAAEYG LIEKVPKEVT IDFLREVVKD VPIPEASGED AKRLSNARAK LFEINRRMRR LREFSDEHKQ YKLTLKATLD SLKPLDTLLK HSTELLRTEI FDDLIDSLNV DLRVLKSATA ARHPVDTQVT KMMDELQKEK TEQEKTIESL PKAQKSFQDT IQLVRFVTRI QTKLETYSAV ASEGPENYDS QINKLNAQLN QLKVEDVANL RDGVIGQIND VSLSLLSEAG GAMSNYASFV TSFNYEARKL QLRRKNSSFI ENVGSSSNHM FLHLFMFLAI HKVAIDRGGR FVPAFLFIDQ PSRPYYGEEK IMDEISLKDS DQAKVSQAFG LLSNFVSRMK KDHDADFQMI VLEHVPVDLF KNLPNVKVLP EFRGANALIP MHWFEP
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