Gene Psyr_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3799 
Symbol 
ID3369334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4515853 
End bp4516881 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content57% 
IMG OID637654157 
Producthypothetical protein 
Protein accessionYP_236868 
Protein GI66047027 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.851496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000320227 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAGA TTCTTTTGAT GCTTGGGCTT TTAATCAGCT CATACGCTGC GACAGGAGCA 
GACATGTCTC ACGGTGCCGA TAATTTCTAC ACAAGCGACA AGGTCGTTGC GCAAAAAGTG
CTGTTCAACA ACCAGTACAA GATGAAAGTC GCGGGCAATC TGTTTATACC CAAAGGCTCG
AACCCGAACG TTAAAGCTCC GGCGATCGTC GTCGGCCATC CGATGGGGGC GGTGAAGGAG
CAAAGCGCCA ATCTGTACGC GCAGAAACTG GCCGAACAAG GGTTTGTCAC CTTGTCGCTG
GATTTGTCGT TCTGGGGCGG GAGCGAAGGC CAGCCACGTA ACGCCGTTTC ACCCGATCTC
TACGCCGAGG ACTTCAGCGC CGCAGTGGAC TTCCTGGGCA CTCAAACCTT CGTGGACAAA
AACCGAATCG GTGTTCTGGG GATTTGCGGC AGTGGCAGCT TTGTCATCAG TGCCGCGAAG
ATCGACCCGC GCATGAAAGC CATTGCCACG GTGAGCATGT ATGACATGGG CGCCGCCAAT
CGCAACGGCC TGAAACACTC GCAGACGCTG GCGCAGCGCA AGAAGATCAT CGAGCAGGCG
GCGCTGCAGC GCGACGTTGA ATACAGCGGC GGTGATACGG CCTACACCAG CGGCACCGTA
CACAAGCTGA CTGACAAATC CGCCCCGATC GAACGCGAGT TCTACGATTT CTATCGCACG
CCACGCGGCG AGTTCACGCC CGAAGGCCAG TCGCCCGAGT TGACCACTCA CCCGACGCTG
ACCAGCAACA TCAAGTTCAT GAACTTCTAT CCGTTCAACG ACATCGCGAC CATCTCGCCA
CGGCCGATGC TGTTCATCGC CGGTTCAGAG GCGCATTCAC TGGAGTTCAG CGAAGAGGCT
TACAAACTGG CCGGCCAGCC CAAGCAACTG ATCATCGTGC CGGAGGCCGG GCATGTGGAT
CTGTACGATC GGGTCGATCT GATCCCGTTC GACAAGCTGG GCGAGTTCTT CAAGAACAAC
CTGAAGTAG
 
Protein sequence
MKKILLMLGL LISSYAATGA DMSHGADNFY TSDKVVAQKV LFNNQYKMKV AGNLFIPKGS 
NPNVKAPAIV VGHPMGAVKE QSANLYAQKL AEQGFVTLSL DLSFWGGSEG QPRNAVSPDL
YAEDFSAAVD FLGTQTFVDK NRIGVLGICG SGSFVISAAK IDPRMKAIAT VSMYDMGAAN
RNGLKHSQTL AQRKKIIEQA ALQRDVEYSG GDTAYTSGTV HKLTDKSAPI EREFYDFYRT
PRGEFTPEGQ SPELTTHPTL TSNIKFMNFY PFNDIATISP RPMLFIAGSE AHSLEFSEEA
YKLAGQPKQL IIVPEAGHVD LYDRVDLIPF DKLGEFFKNN LK