Gene Psyr_3776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3776 
Symbol 
ID3369311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand- 
Start bp4495335 
End bp4495772 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content58% 
IMG OID637654134 
Productcytosine deaminase 
Protein accessionYP_236845 
Protein GI66047004 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.650074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.286073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAT TCATGCAGGC AGCATTCGAT GAGGCGCAAC TCGGGCTGAA GGAAGGCGGA 
ATCCCTATCG GCTCGGTCAT CGTCCACGGC GGCAAAATCA TCGGTCGAGG CCACAACCGT 
CGTGTACAAG AGGGCAGTGC GACGAAGCAT GGCGAGATGG ATGCGCTGGA AAATGCCGGT 
CGCCAGCCTG CCAGTGTCTA CCGTGACTCG GTCCTCTACA CCACGCTGTC GCCTTGTGCG 
ATGTGCAGCG GTGCGATCCT GCTCTACGGG ATTCGCAAAG TGATCATCGG TGAGAATGAG 
TCCTTCATGG GCGAGGAAGA ACTGCTGCGC TCGCGTGGCG TGCAGATCGA CGTGCTGGAT 
AACCCTGAGT GCACACACAT GATGAAAGAC TTTATCGCCA GCAAGCCCGA ACTGTGGAAC 
GAAGACATCG GCGAGTGA
 
Protein sequence
MDAFMQAAFD EAQLGLKEGG IPIGSVIVHG GKIIGRGHNR RVQEGSATKH GEMDALENAG 
RQPASVYRDS VLYTTLSPCA MCSGAILLYG IRKVIIGENE SFMGEEELLR SRGVQIDVLD 
NPECTHMMKD FIASKPELWN EDIGE