| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3756 |
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| Symbol | actP |
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| ID | 3369291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4472506 |
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| End bp | 4474164 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637654114 |
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| Product | acetate permease |
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| Protein accession | YP_236825 |
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| Protein GI | 66046984 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.574544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.130195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGC GCCTATCAGC AGCACTTGGC CTGGCCGCCT TCGCGCCGAC CCTCTGGGCG
GCAGACGCGT TGACGGGTGC AGTGCAGAAA CAACCCCTGA ACGTCGCCGC GATCGTCATG
TTCGTGGTCT TCGTCGCTTT CACGCTGTAC ATCACCTACT GGGCATCGAA AAAGAACAAG
ACAGCGTCGG ACTATTACTC GGCAGGTGGC AAGATCACCG GCTTCCAGAA CGGTCTGGCG
ATCGCCGGTG ACTACATGTC GGCAGCGTCC TTTCTGGGTA TTTCCGCGCT GGTCTACACC
TCCGGCTACG ATGGCCTGAT CTACTCGATC GGCTTCCTGG TAGGCTGGCC GATCATCCTG
TTCCTGATCG CCGAACGCCT GCGCAACCTG GGTAAATACA CCTTTGCCGA TGTGGCGTCG
TACCGCCTCA AGCAAAAGGA AATTCGCACC CTGTCTGCCT GCGGCTCACT GGTGGTGGTG
GCGTTTTACC TGATTGCGCA GATGGTCGGT GCCGGCAAGC TGATCCAGTT GCTGTTCGGT
CTGGACTACG CCGTTGCGGT GGTGCTGGTC GGTATCCTGA TGTGCCTCTA TGTGCTGTTC
GGCGGCATGC TCGCTACCAC CTGGGTGCAG ATCATCAAGG CGGTGATGTT GCTGTCCGGT
GCGTCGTTCA TGGCATTGAT GGTCATGAAG CACGTCAACT TCGACTTCAA CATGCTGTTC
TCCGAAGCGA TCAAGGTTCA CCCCAAAGGT GAAGCGATCA TGAGCCCTGG CGGGCTGGTG
AAAGACCCGA TCTCGGCGTT CTCGCTGGGT CTGGCCCTGA TGTTCGGTAC TGCGGGCCTG
CCACACATCC TGATGCGCTT CTTCACCGTG AGCGATGCCA AGGAAGCGCG CAAGTCGGTG
CTCTACGCAA CCGGCTTTAT CGGTTACTTC TACATCCTGA CCTTCATCAT CGGTTTCGGC
GCGATCCTGC TGGTCAGCAC CAATCCGGCG TTCAAGGATG CAGCAGGCGC CTTGTTGGGC
GGTAACAACA TGGCTGCGGT TCACCTGGCC GATGCGGTCG GTGGCAGTCT GTTCCTGGGC
TTCATCTCGG CAGTCGCTTT CGCCACCATT CTGGCAGTGG TTGCCGGTCT GACCCTGGCG
GGTGCTTCGG CGGTTTCCCA CGACTTGTAT GCCAGCGTCA TCAAGGCAGG CAAAGCCAAC
GAGAAGGACG AGATCCGTAT CTCGAAAATC ACCACCATTG CCCTGGCGGT CGTGGCGATC
TTTCTGGGTA TTGCCTTTGA AAGCCAGAAC ATCGCCTTCA TGGTGGGCCT GGCGTTCTCG
GTCGCGGCAA GCTGCAACTT CCCGATTCTG CTGCTTTCCA TGTACTGGAA AAACCTGACC
ACCCGTGGCG CCATGATCGG CGGCTGGATG GGCCTGATCA GTGCAGTGGT GCTGATGGTG
CTCGGTCCGA CCATCTGGGT GCAGATCCTG CACCACGAGA AAGCCATTTT CCCTTACGAA
TACCCGGCGC TGTTTTCCAT CGCCATCGCC TTCGTAGGTA TCTGGTTCTT CTCCATCACC
GACAAGTCGA AAGCGGCGGA GGGCGAGCGC GCTCTGTTCT ATCCGCAATT CGTCCGCTCG
CAGACGGGGC TGGGTGCCAG TGGTGCGGTT TCGCACTAA
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| Protein sequence | MIRRLSAALG LAAFAPTLWA ADALTGAVQK QPLNVAAIVM FVVFVAFTLY ITYWASKKNK
TASDYYSAGG KITGFQNGLA IAGDYMSAAS FLGISALVYT SGYDGLIYSI GFLVGWPIIL
FLIAERLRNL GKYTFADVAS YRLKQKEIRT LSACGSLVVV AFYLIAQMVG AGKLIQLLFG
LDYAVAVVLV GILMCLYVLF GGMLATTWVQ IIKAVMLLSG ASFMALMVMK HVNFDFNMLF
SEAIKVHPKG EAIMSPGGLV KDPISAFSLG LALMFGTAGL PHILMRFFTV SDAKEARKSV
LYATGFIGYF YILTFIIGFG AILLVSTNPA FKDAAGALLG GNNMAAVHLA DAVGGSLFLG
FISAVAFATI LAVVAGLTLA GASAVSHDLY ASVIKAGKAN EKDEIRISKI TTIALAVVAI
FLGIAFESQN IAFMVGLAFS VAASCNFPIL LLSMYWKNLT TRGAMIGGWM GLISAVVLMV
LGPTIWVQIL HHEKAIFPYE YPALFSIAIA FVGIWFFSIT DKSKAAEGER ALFYPQFVRS
QTGLGASGAV SH
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