Gene Psyr_3745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3745 
Symbol 
ID3369280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4462360 
End bp4463439 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content62% 
IMG OID637654103 
Producthypothetical protein 
Protein accessionYP_236814 
Protein GI66046973 
COG category[R] General function prediction only 
COG ID[COG5621] Predicted secreted hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.114151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0295635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTA AATGGCTGGT GCCGCTGGTC ATCGTCGTGC TGCTCACTGC CTGCGACGAC 
AAACCGCAAC CTGAAAGCGG TTTCGCCGGT CTGGGCAATA CGGCCGACAG CTATGCGCAG
GTGACACCCG GCAAGGTTTT TTCATTCCCG CAGGACCACG GCCAGCACCC CGGCTTTCGG
ATCGAGTGGT GGTACATCAC CGCCACCCTC AAGGATGACG CGGGCCAGCA GTTCGGCGTG
CAATGGACCC TGTTTCGCAA TGCCCTACGC CCCGGCCAAC AGACCGGCAG CGGCTGGAAT
GACGGCACGA TCTGGCTGGG CCATGCAGCG GCGACTTCTA GCAGCGGTCA TTATGTGGCG
GAGCGTTACG CGCGCGGCGG CATCGGTCAG GCCGACGTGA CGCTGGCGCC CTTCTCGGCG
TGGATTGATG ACTGGGCATT TACCAGCCAT GTCCGCAACG GTGATCCGCT GGCGGCCATG
CAGCTGAAGG CCAGCGGCAA GGACTTTCGC TACAACCTGA ACCTGACATC CAGCAAGCCG
CTGGTGCTGC AGGGTGAACA GGGCTACAGC CAGAAATCGG AGGCGGGCCA GGCGTCGTAC
TACTACAGCC AGCCATTCTT CGATGCCAAA GGCAGCGTGG TCATCGAGGG CAAAACACAT
CAGGTCACCG GTAAAGCGTG GCTGGACCGG GAATGGAGCA GTCAGCCACT GACCGCCAAC
CAGAGCGGCT GGGACTGGTT TTCGCTGCAA CTGGCAGACG GTGATCGCCT GATGCTCTAT
CGCATCCGCC ACAAGAGCAC TGCCCCCTAC CTGACCGGTA ACTGGATCAG CGCCGACGGC
ACCACCCGGA TGCTGCACGC CAACGAGATC AGCCTTGAGC CACTGAAAGA AACCTCGATC
GGCGAGCATA AAGTGCCCAC CCGCTGGAGA ATCAGGGTCC CCGACCGAAA TCTGGACATC
ACCAGCGAAG CGCTGAACCC TGCTGCCTGG ATGGGCGTGA GTATCCCCTA CTGGGAGGGG
CCGGTGAGGT TCAGCGGGAG TCAGGAAGGC GTGGGGTATC TGGAGATGAC CGGGTATTGA
 
Protein sequence
MNRKWLVPLV IVVLLTACDD KPQPESGFAG LGNTADSYAQ VTPGKVFSFP QDHGQHPGFR 
IEWWYITATL KDDAGQQFGV QWTLFRNALR PGQQTGSGWN DGTIWLGHAA ATSSSGHYVA
ERYARGGIGQ ADVTLAPFSA WIDDWAFTSH VRNGDPLAAM QLKASGKDFR YNLNLTSSKP
LVLQGEQGYS QKSEAGQASY YYSQPFFDAK GSVVIEGKTH QVTGKAWLDR EWSSQPLTAN
QSGWDWFSLQ LADGDRLMLY RIRHKSTAPY LTGNWISADG TTRMLHANEI SLEPLKETSI
GEHKVPTRWR IRVPDRNLDI TSEALNPAAW MGVSIPYWEG PVRFSGSQEG VGYLEMTGY