| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3736 |
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| Symbol | |
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| ID | 3369271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4449181 |
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| End bp | 4451394 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637654094 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_236805 |
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| Protein GI | 66046964 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.016486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA GTTTACTGGC TGCTGTCGAA GGTGCAGGCC GCAAGGCGCG CGAGGCGTTT
GGCAAGGGCG TGTTGGCGGT TTCGTTGCTG ACCTGCTCCA CGCTGGCGTC GGCGTTGGGC
CTGGGTGAAA TCACCTTGCA TTCGGCGCTC AACCAGCCGT TGGATGCCGA GATTCAGCTG
CTGGAAACCG GCGGTCTGAG CAATGAAGAC GTGGTCGCCC GGCTTGCTTC GCCCGAAGCG
TTCGCCAAAG CAGGCATGGA ACGCGTGTTC TTTCTCAATG ATTTGCGCTT CACGCCGGTA
CTGCGCGGTG ACCGCGGCGT GATCCGGGTG GTGTCCAGCA AGCCGGTCAC CGAACCCTAC
CTGAGTTTTC TCGTTCAGCT GGCGCGGCCG AATGGCGATT TGCTGCACGA ATACACCTTG
CTGCTCGATC CTGCCACCTC GGCGCAAGGC CTGGCCGCCA CGCGCAGCCG CAACCAGCAG
CGCTCGGCCA GCTCCGCCTC GGAAAGCCGC ATGCCGGTCG CGCCACCGGC GGCCGTGCAG
GGCAAACACT ATACGGTGGC CAGTGGCGAC ACGCTGAATG GTATCGCCAG CCGCTTGCAG
GGACCGGGCA ACAAGGTGTC GGCCAGCCAG CTGGCGGACG GCATCCGTTC GCTCAACCCG
CAGGTCTTCG CCGCAGGCGC CGGCTCTGCG CTCAAAGTCG GCCAGGACCT GTTGCTGCCG
GACGCCGCAG TGCTGCCAAC CGCCGCAGCG CCTGCCGCAA GCGCTGCGGC GCCGTCGCCA
AAGCCTGCCG AACTGCAGCG CACCGCTGAG CAGTTGTCGG CTGCTGCCAT CGAAAACCAG
CAATTGACTC AGTCGCTGGA GGCGCTCAAG GCCCAGACTC AGGAACTGCA AGAGCAGATG
AGCGGCAAGG ACAAACAGAT CATTGCTTTG CGCAGCGATC TGGCCACGGC GCAATCCGCC
GCTACGCCAG TTGCACCTGC AACAACCACA CCTGCACCCG CCACGCCGGT AGCTGCGCCT
GCCGCTCCTG CGCAACCTGT TGCTGCGTCG GGCAGCGATT CCTTCCTGAG CCTGCCGATA
CTGCTCGCTG CCGTATTGAT CGTACTGCTG CTGGTGGCGT TTGCTTATTC GAAGCGACGT
CAGCAGCGCA AGGAATCAGC GGCACCCGGA GTCACTCCGG ATGACCCGCT GATCAAGCCC
GCTCAGGCCG CCATGCTGCC GGTGTTCGAA GTGCCTGCCG TGGCGCCGCA ACCCGTGGTG
CAGAGCCCGA CGACACCGGC ACCGGCCAAA CCTTCGCCAG CACAACGTTC CGCTGGCTCT
GCCCCGGATG CGCTGGACGG TGTGAGCATT TACATCGCCT ACGGGCGGTT CACCGAGGCA
ATGGGTATTC TGCGCAGCGC CCTGGAAACC CAGCCTGAGC GTGATGACAT TCGCATCCGC
CTGCTGGAGT TGCTCGCTGA ACAGGGCGAC GGCAGCGGTT TCGTTCGCGA AGAACAGGCC
GCGCTGGAGC ATGGCGTCGA TCCGCAGACC ATTCAGGACA TCCGCGATCG CTTCCCGCAA
CTCAAGGCTG CCGAGGTCGC TCCCTTGGCG GCAATCGTCC CGGCTGCCGC GCTGGCAGCC
AGCGCACTGT CGTTCGAGAA ATCCGAGCCC GAGCCTTCGC GCTACCTGCA GCCCGAGCCT
GAGCCAGAAC CCGCCGCGCA GCTGGATGAA AGCGCCGCTG CGGCGCTGAA TCCGCAGCCC
GCCGACGAGT TTCAGTTGAA CCTGGATGAC CTGTCGATGG ACGCCGATTG GGACCTGGTC
GACCCGTTCG ACAGCCCACC GCCGCGTGCC AAGCCTGCCG CTGCGCCAGC CCCCGTTGAA
GTCGATCCCG GTTTTTCTTC GGACCTGACC CAACTGCCGG AAGTCTTCGA ACTCTCGGAC
GAACAGTTCC TCAGTGATTT CTCCGAGCCT GAGGTCGTTG AGCCTGTTGA GGTAATCGTG
CCATCCGCCG CCGACGGTCT GAGTGACGAT TTCCTCGACA GTTTCATGAA CGATGACGCC
GATTTCGACC TGCTGGACCT GGAAGAGCCG CCGCTCAGCC AGATCAATCA GGCGCAGGTG
CTGATCGAGG ACGGCGATCT CGAATCGGCC CGTGAAATCC TCCAGCAGAT CATTGACGAG
TCCGACGAAG AGCATCAGCG CATGGCGCGG GAGCTGCTGG CCAGCATCAG CTGA
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| Protein sequence | MLKSLLAAVE GAGRKAREAF GKGVLAVSLL TCSTLASALG LGEITLHSAL NQPLDAEIQL
LETGGLSNED VVARLASPEA FAKAGMERVF FLNDLRFTPV LRGDRGVIRV VSSKPVTEPY
LSFLVQLARP NGDLLHEYTL LLDPATSAQG LAATRSRNQQ RSASSASESR MPVAPPAAVQ
GKHYTVASGD TLNGIASRLQ GPGNKVSASQ LADGIRSLNP QVFAAGAGSA LKVGQDLLLP
DAAVLPTAAA PAASAAAPSP KPAELQRTAE QLSAAAIENQ QLTQSLEALK AQTQELQEQM
SGKDKQIIAL RSDLATAQSA ATPVAPATTT PAPATPVAAP AAPAQPVAAS GSDSFLSLPI
LLAAVLIVLL LVAFAYSKRR QQRKESAAPG VTPDDPLIKP AQAAMLPVFE VPAVAPQPVV
QSPTTPAPAK PSPAQRSAGS APDALDGVSI YIAYGRFTEA MGILRSALET QPERDDIRIR
LLELLAEQGD GSGFVREEQA ALEHGVDPQT IQDIRDRFPQ LKAAEVAPLA AIVPAAALAA
SALSFEKSEP EPSRYLQPEP EPEPAAQLDE SAAAALNPQP ADEFQLNLDD LSMDADWDLV
DPFDSPPPRA KPAAAPAPVE VDPGFSSDLT QLPEVFELSD EQFLSDFSEP EVVEPVEVIV
PSAADGLSDD FLDSFMNDDA DFDLLDLEEP PLSQINQAQV LIEDGDLESA REILQQIIDE
SDEEHQRMAR ELLASIS
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