Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3697 |
Symbol | cysM |
ID | 3369232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4384397 |
End bp | 4385338 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654056 |
Product | cysteine synthase B |
Protein accession | YP_236767 |
Protein GI | 66046926 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | [TIGR01136] cysteine synthases [TIGR01138] cysteine synthase B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.703798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00106032 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATAGGCA CCCCCCGCAG TCTGGATTGC GAAGACGCCA TGACCCTGCA GTATCAAACC ATTGCCGATT GCGTCGGCAA CACCCCGCTG GTGCGTCTGC AACGCATGGC GGGTAATACC AGCAATACCC TCCTGTTGAA ACTCGAAGGT AACAACCCCG CTGGCTCGGT AAAAGACCGC CCGGCCTTGT CGATGATCAC CCGCGCCGAG TTGCGCGGCC AGATCCATCC GGGTGACACG CTGATCGAAG CCACCTCCGG CAATACCGGA ATCGCGCTGG CCATGGCTGC GGCGATCAAG GGCTACCGGA TGATTCTGAT CATGCCGGAC AACTCCAGTG CCGAACGCAA GGCCGCGATG ACCGCCTATG GCGCCGAGCT GATTTCGGTC AGCAAGGATG ACGGCATGGA AGGTGCCCGT GATCTGGCCG AGCGCATGCA GGCCGAAGGC CGTGGCAAGG TGCTCGATCA GTTTGCCAAT GGCGACAACC CCGAGGCGCA TTACACGTCC ACCGGTCCGG AAATCTGGCG GCAGACGGGC GGTACCGTGA CCCATTTCGT CAGTTCGATG GGCACCACCG GCACCATCAT GGGCACCTCG CGCTACCTCA AGGAGCAGAA TCCCGACGTG CAGATCGTCG GTCTGCAACC GATGGAGGGC GCTTCGATCC CCGGTATTCG CCGCTGGCCG CAGGAATACC TGCCGAAAAT CTATCAGTCG GACCGTGTCG ACCGCATCAT CGACATGGGC CAGAGCGAAG CCGAAGACAC CATGCGCCGC CTCGCTCGCG AAGAAGGCAT CTTCTGTGGC GTGTCGTCCG GTGGCTCGGT CGCCGGGGCG TTGCGTATTT CCCGGGAAGT CGAAAACGCC GTGATTGTGG CGATCATCTG TGACCGAGGC GACCGTTACC TGTCGACCGG CGTCTATGAT TCGCCCAACT GA
|
Protein sequence | MIGTPRSLDC EDAMTLQYQT IADCVGNTPL VRLQRMAGNT SNTLLLKLEG NNPAGSVKDR PALSMITRAE LRGQIHPGDT LIEATSGNTG IALAMAAAIK GYRMILIMPD NSSAERKAAM TAYGAELISV SKDDGMEGAR DLAERMQAEG RGKVLDQFAN GDNPEAHYTS TGPEIWRQTG GTVTHFVSSM GTTGTIMGTS RYLKEQNPDV QIVGLQPMEG ASIPGIRRWP QEYLPKIYQS DRVDRIIDMG QSEAEDTMRR LAREEGIFCG VSSGGSVAGA LRISREVENA VIVAIICDRG DRYLSTGVYD SPN
|
| |