| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3688 |
|---|
| Symbol | |
|---|
| ID | 3369223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4374230 |
|---|
| End bp | 4375333 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637654047 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_236758 |
|---|
| Protein GI | 66046917 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3249] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000276179 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTTT CCAGAATTCT TCTAATCGGC TGTCTGTCCC TGATCAGCCT TCCCAGCCTT
GCCGAAACGG TCAGCAACCT TTATCAGGTC CGCGAACCGG TCAATGGCCA GTCGCCCGAT
GAGCGCACGC GGGCCACGCA GGCCGCCGTC GACACCCTGG TGCTGCGCCT GACCGGCGAC
GCCAAGGCCG TGCAGGGTTC GGCCATCGCC GCGCTGCGCA AGGACCCGCA GCAGATCATC
AGCCAGTACG GTTACGAGGC CGGGCCGCCG GAGACCCTGC TGGTCGACTT CGATCCGGCA
ACCACCGAAC GCGCGTTGCG CGATGCGGGT CTGTCGATCT GGGGCAGCAA TCGTCCGTCG
ATTCTCGGCT GGTGGCTGAA TGATTCGGTG GAAGGCTCGA ATCTGGTCGG CGACGGTCAG
GCCGCCGCCG AACCCTTGCG CCAGGCCGCT CAGCACCGAG GACTGCCGCT GCGTCTGCCG
CTGGCTGATT TGAGCGAGCA GGGCATCGGT AATGCGAAGA CCCTGGAGGG CACTGACCCT
GCACCGCTCA AGGAAGCCTC CGAGCGCTAT GGCGCCGACG CGATACTGGC TGTGCATGCT
AAGGAAGATG GCGGTCAGTG GCAGGGCAAA TGGCGCTTGT GGCTGGGTGA TCAGCGTGAA
CAGGGCAGCG CGACCGGTGC CAGCTCCGAG GCGCTGGCCG ATGCGGTGCT GCTGTCGGTA
AGCGAGCGTC TGGCGCCGCG CTTCGTTGCC AAGCCCGGTG CGTCGACCGG CATGCTGATC
CAGGTTCAGG GCATGACGCT TGAGCGCTAT GCGCAACTGC TTCAGTTACT CGAACCGTTC
GGCGTGCGTC TGAGTTCTGT CGAAGGCGAC AAAGTGGTGT TTGAGGTCAG CGGCAGCACC
GATCAGCTAC GCTCGCAGTT GTCGCTGGCC AAACTGCAGG AAGTGCCCGC AGCCGAAGCA
GCCGCTACCG CAACGCCGCC TGCTGCGCCT GTCGATGCGA CTGCGCCGGT TGCGCCAGCC
AATGGAGCCG CTGCTGTTCC GGCACCTGCG CCCGCACCGA TGATTGTTCC GGCGTCCGCG
CCACAACTTT ATTTCCGCTG GTAA
|
|---|
| Protein sequence | MRFSRILLIG CLSLISLPSL AETVSNLYQV REPVNGQSPD ERTRATQAAV DTLVLRLTGD
AKAVQGSAIA ALRKDPQQII SQYGYEAGPP ETLLVDFDPA TTERALRDAG LSIWGSNRPS
ILGWWLNDSV EGSNLVGDGQ AAAEPLRQAA QHRGLPLRLP LADLSEQGIG NAKTLEGTDP
APLKEASERY GADAILAVHA KEDGGQWQGK WRLWLGDQRE QGSATGASSE ALADAVLLSV
SERLAPRFVA KPGASTGMLI QVQGMTLERY AQLLQLLEPF GVRLSSVEGD KVVFEVSGST
DQLRSQLSLA KLQEVPAAEA AATATPPAAP VDATAPVAPA NGAAAVPAPA PAPMIVPASA
PQLYFRW
|
|---|
| |