Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3683 |
Symbol | |
ID | 3369218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4369999 |
End bp | 4370544 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654042 |
Product | NLP/P60 |
Protein accession | YP_236753 |
Protein GI | 66046912 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00454661 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGATTG CGTTGCGCCT GTTAGTCATC TCTGTTGCTG CGTTGCTCGG TGCCTGCGCC AGCGCGCCGC CTCCGCCCAA AGCGCCCCGG ATCGTTCAGC GTCCGGTGGT CACTGCACCT CCCCAGATTC TTTCTCCGGC TGCCGAAGAC GTGCTGTTTC GTGCGTTGGG GCTGGTTGGC ACGCCTTATC GCTGGGGCGG CAACACGCCT GACTCCGGTT TCGATTGCAG CGGTCTTATA GGCTATGTCT ATCGTGATGC GGCGGGCATT TCCCTGCCGC GTTCCACACG CGAGATGATC GTGATGGGCG CACCGAATAT TCGTCGCGAG CAATTGCAGT CAGGTGATCT GGTGTTCTTC GCCACATCGG GCGGTTCTCA GGTGTCCCAC GCCGGGATCT ATGTCGGCGA AGGCCGCTTC GTGCATGCGC CGGCCACCGG CGGCACGGTC AAGCTCGACA GCCTCGACAA GCCTTACTGG CAGAGAGCCT ATCTCAACGC CAAACGCGTG ATTCAGCCGT CCAGCCTGGC GCAGAATCGG CCTTAA
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Protein sequence | MSIALRLLVI SVAALLGACA SAPPPPKAPR IVQRPVVTAP PQILSPAAED VLFRALGLVG TPYRWGGNTP DSGFDCSGLI GYVYRDAAGI SLPRSTREMI VMGAPNIRRE QLQSGDLVFF ATSGGSQVSH AGIYVGEGRF VHAPATGGTV KLDSLDKPYW QRAYLNAKRV IQPSSLAQNR P
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