Gene Psyr_3683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3683 
Symbol 
ID3369218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4369999 
End bp4370544 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content62% 
IMG OID637654042 
ProductNLP/P60 
Protein accessionYP_236753 
Protein GI66046912 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00454661 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGATTG CGTTGCGCCT GTTAGTCATC TCTGTTGCTG CGTTGCTCGG TGCCTGCGCC 
AGCGCGCCGC CTCCGCCCAA AGCGCCCCGG ATCGTTCAGC GTCCGGTGGT CACTGCACCT
CCCCAGATTC TTTCTCCGGC TGCCGAAGAC GTGCTGTTTC GTGCGTTGGG GCTGGTTGGC
ACGCCTTATC GCTGGGGCGG CAACACGCCT GACTCCGGTT TCGATTGCAG CGGTCTTATA
GGCTATGTCT ATCGTGATGC GGCGGGCATT TCCCTGCCGC GTTCCACACG CGAGATGATC
GTGATGGGCG CACCGAATAT TCGTCGCGAG CAATTGCAGT CAGGTGATCT GGTGTTCTTC
GCCACATCGG GCGGTTCTCA GGTGTCCCAC GCCGGGATCT ATGTCGGCGA AGGCCGCTTC
GTGCATGCGC CGGCCACCGG CGGCACGGTC AAGCTCGACA GCCTCGACAA GCCTTACTGG
CAGAGAGCCT ATCTCAACGC CAAACGCGTG ATTCAGCCGT CCAGCCTGGC GCAGAATCGG
CCTTAA
 
Protein sequence
MSIALRLLVI SVAALLGACA SAPPPPKAPR IVQRPVVTAP PQILSPAAED VLFRALGLVG 
TPYRWGGNTP DSGFDCSGLI GYVYRDAAGI SLPRSTREMI VMGAPNIRRE QLQSGDLVFF
ATSGGSQVSH AGIYVGEGRF VHAPATGGTV KLDSLDKPYW QRAYLNAKRV IQPSSLAQNR
P