Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3679 |
Symbol | |
ID | 3369214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4365338 |
End bp | 4365988 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637654038 |
Product | nitroreductase |
Protein accession | YP_236749 |
Protein GI | 66046908 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | [TIGR02476] cob(II)yrinic acid a,c-diamide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.033589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC AAGCGTTCAG CCCCGAAGAG CGGGCTGCGG TGTACCGCGC CATCGCCGAA CGTCGCGACA TGCGCCACTT CATCGGCGGC ACGGTCGCGC CCGAGCTGCT GGCACGTGTG CTGGAGGCCG CGCATCAGGC CCCCAGCGTC GGGCTGATGC AACCGTGGCG CTTCATCCGC ATCAGCGACC CGCTATTGCG CGGCAGGATG CAGGCGCAGG TAGAGCAAGA GCGTATCCGG ACCGCCGAGG CGCTGGGTGA GCGCACCGAC GAATTCATGA AGCTCAAGGT CGAAGGCATC AACGACTGTG CAGAAGTGCT GGTCGCCGCG CTGATGGAAG GGCGTGAGCA ACACATTTTC GGCCGGCGCA CCTTGCCGGA AATGGACATG GCTTCGCTGT CCTGCGCGAT CCAGAACCTG TGGCTGGCCT CGCGTGCAGA AGGCCTGGGC ATGGGCTGGG TGTCGCTGTT CGACCCCGAG GCGCTGGCCG AACTGCTGGG CATGCCTGAC GGCGCCAAGC CGTTGGCGAT CATTTGCCTG GGCCCGGTCA AGGAATTTTA TCCCGCGCCA ATGCTGGTGA TGGAAGGCTG GGCGCAGGCG CGTCCGCTGC ATGAGTTGCT GTACGAGAAT CAATGGGGAG TGAGTCAATG A
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Protein sequence | MTEQAFSPEE RAAVYRAIAE RRDMRHFIGG TVAPELLARV LEAAHQAPSV GLMQPWRFIR ISDPLLRGRM QAQVEQERIR TAEALGERTD EFMKLKVEGI NDCAEVLVAA LMEGREQHIF GRRTLPEMDM ASLSCAIQNL WLASRAEGLG MGWVSLFDPE ALAELLGMPD GAKPLAIICL GPVKEFYPAP MLVMEGWAQA RPLHELLYEN QWGVSQ
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