Gene Psyr_3679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3679 
Symbol 
ID3369214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4365338 
End bp4365988 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID637654038 
Productnitroreductase 
Protein accessionYP_236749 
Protein GI66046908 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR02476] cob(II)yrinic acid a,c-diamide reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.033589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC AAGCGTTCAG CCCCGAAGAG CGGGCTGCGG TGTACCGCGC CATCGCCGAA 
CGTCGCGACA TGCGCCACTT CATCGGCGGC ACGGTCGCGC CCGAGCTGCT GGCACGTGTG
CTGGAGGCCG CGCATCAGGC CCCCAGCGTC GGGCTGATGC AACCGTGGCG CTTCATCCGC
ATCAGCGACC CGCTATTGCG CGGCAGGATG CAGGCGCAGG TAGAGCAAGA GCGTATCCGG
ACCGCCGAGG CGCTGGGTGA GCGCACCGAC GAATTCATGA AGCTCAAGGT CGAAGGCATC
AACGACTGTG CAGAAGTGCT GGTCGCCGCG CTGATGGAAG GGCGTGAGCA ACACATTTTC
GGCCGGCGCA CCTTGCCGGA AATGGACATG GCTTCGCTGT CCTGCGCGAT CCAGAACCTG
TGGCTGGCCT CGCGTGCAGA AGGCCTGGGC ATGGGCTGGG TGTCGCTGTT CGACCCCGAG
GCGCTGGCCG AACTGCTGGG CATGCCTGAC GGCGCCAAGC CGTTGGCGAT CATTTGCCTG
GGCCCGGTCA AGGAATTTTA TCCCGCGCCA ATGCTGGTGA TGGAAGGCTG GGCGCAGGCG
CGTCCGCTGC ATGAGTTGCT GTACGAGAAT CAATGGGGAG TGAGTCAATG A
 
Protein sequence
MTEQAFSPEE RAAVYRAIAE RRDMRHFIGG TVAPELLARV LEAAHQAPSV GLMQPWRFIR 
ISDPLLRGRM QAQVEQERIR TAEALGERTD EFMKLKVEGI NDCAEVLVAA LMEGREQHIF
GRRTLPEMDM ASLSCAIQNL WLASRAEGLG MGWVSLFDPE ALAELLGMPD GAKPLAIICL
GPVKEFYPAP MLVMEGWAQA RPLHELLYEN QWGVSQ