| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3678 |
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| Symbol | cobD |
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| ID | 3369213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4364433 |
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| End bp | 4365341 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637654037 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_236748 |
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| Protein GI | 66046907 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.035544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGTGG CGCTGCTGAG CGTCGCCGGA GTCGCGCTGG ATGCGCTGCT CGGTGAGCCG
AAACGATGGC ATCCGCTGGT GGCGTTCGGC AACTTCGCCA GTCGGGTCGA GCAGCGTTTC
AACAGTGGCG GCCGTGGCTG GCGCAGTCAC GGCGTTACCG CCTGGGTCAT CACTGTTGTG
CCGCTGACGT TGCTGGCCAC GCTGCTGAGC TGGTTGCCTG GCGTGGGCTG GCTGTTCGAG
ATTCTGGCGC TGTATTGCGC GCTGGGCATG CGTAGCCTGG GCGAGCACGT TCAGCCGGTG
GCGCAAGCGC TGCGCAGTGA TGATCTGATC GAAGCACGTC AGCGCGTCGG TTATCTGGTC
AGTCGCCAGA CCACTGAGCT GGACGCTACC GAAGTCGCCC GCGCAGCCAC CGAGTCGGTG
CTGGAGAACG GCAGCGATGC GGTGTTCGCT GCGCTGTTCT GGTTCATGGT GGCCGGTGCG
CCCGGCGTGG TGCTGTACCG GCTGAGCAAT ACGCTGGACG CCATGTGGGG CTATCGCAAC
GAGCGCTTTG AGCGTTTTGG CTGGGCTGCG GCGAAGATCG ACGATCTGCT CAACTATATT
CCCGCACGTC TTGTGGCATT GACTTACGCC TTGCTGGGCA AGACCCGACT GGCGCTGCGT
TGCTGGCGCA CACAGGCTCC GGCCTGGGAC AGTCCGAATG CCGGTCCGGT GATGGCCGCT
GGCGCAGGCG CGCTGGGTGT CGAGCTGGGT GGCGCGGCGA TCTATCACGG CGAGCTGCAT
CAGCGTCCGC AACTGGGCGA GGGTGCGCCT GCCGATGCGG ACTCGATCGA TCGCGGCTGG
CAACTGGTGC AGCGCGGCGT GTGGTTATGG CTGCTGGTCA TCTGCGTGGC GGCTGAATTT
TATGCTTGA
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| Protein sequence | MSVALLSVAG VALDALLGEP KRWHPLVAFG NFASRVEQRF NSGGRGWRSH GVTAWVITVV
PLTLLATLLS WLPGVGWLFE ILALYCALGM RSLGEHVQPV AQALRSDDLI EARQRVGYLV
SRQTTELDAT EVARAATESV LENGSDAVFA ALFWFMVAGA PGVVLYRLSN TLDAMWGYRN
ERFERFGWAA AKIDDLLNYI PARLVALTYA LLGKTRLALR CWRTQAPAWD SPNAGPVMAA
GAGALGVELG GAAIYHGELH QRPQLGEGAP ADADSIDRGW QLVQRGVWLW LLVICVAAEF
YA
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