Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3672 |
Symbol | cobS |
ID | 3369207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4359106 |
End bp | 4359837 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637654031 |
Product | cobalamin synthase |
Protein accession | YP_236742 |
Protein GI | 66046901 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0368] Cobalamin-5-phosphate synthase |
TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00479037 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0808268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCCGT TCTGGATCGC CCTGCAATTT CTCGGCAGCC TGCCGATCAG GCTGCCCGGC ATGCCGAGCC CCGAGGAGCT GGGGCGTTCC TTGCTGTTTT ACCCGTTGGT GGGGGCGGTG TTCGGCACGC TGCTGCTGGG CTTCAACACG CTGCTCAGTG GTGCGCCGCT GATGCTGCAC GCCGCGCTGG TACTCACTGC CTGGGTGTTG CTCAGCGGCG GCCTGCATCT GGACGGTCTG GCCGACAGTG CTGACGCCTG GCTGGGCGGC TTCGGTGACC GTGAACGCAC CTTGAAGATC ATGAAAGACC CACGCAGCGG GCCTATCGCC GTGGTCACGC TGGTCCTGGT GCTGCTGCTC AAGTTTGCTG CGATTCTGGC GCTGATCGAG AGCCATGCCA GCGTCTGGCT GCTGTTGGCA CCGGTGATCG GGCGCGCGGC CATGCTTGGG CTGTTTCTGG GGACGCCGTA TGTGCGTTCC GGCGGGCTGG GGCAGGCGTT GGCCGATCAC CTGCCGCGCG GCCCTGGACG CAAGGTTTTG CTCGCCACCG CCATTGCGTG CGTGCTGCTC GCCGGCTGGT CGGGGGTAGC CGTATTGCTG GTCTGCGCCG TCTGTTTCTT CTGGCTGCGG CAACTGATGA TGCGCCGTCT GGGCGGATGC ACCGGTGATA CAGCCGGGGC ATTGCTCGAG CTGCTGGAGT TGGCGGTGCT GCTGACGCTG GCGCTGCTTT GA
|
Protein sequence | MLPFWIALQF LGSLPIRLPG MPSPEELGRS LLFYPLVGAV FGTLLLGFNT LLSGAPLMLH AALVLTAWVL LSGGLHLDGL ADSADAWLGG FGDRERTLKI MKDPRSGPIA VVTLVLVLLL KFAAILALIE SHASVWLLLA PVIGRAAMLG LFLGTPYVRS GGLGQALADH LPRGPGRKVL LATAIACVLL AGWSGVAVLL VCAVCFFWLR QLMMRRLGGC TGDTAGALLE LLELAVLLTL ALL
|
| |