Gene Psyr_3672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3672 
SymbolcobS 
ID3369207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4359106 
End bp4359837 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID637654031 
Productcobalamin synthase 
Protein accessionYP_236742 
Protein GI66046901 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00479037 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0808268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCGT TCTGGATCGC CCTGCAATTT CTCGGCAGCC TGCCGATCAG GCTGCCCGGC 
ATGCCGAGCC CCGAGGAGCT GGGGCGTTCC TTGCTGTTTT ACCCGTTGGT GGGGGCGGTG
TTCGGCACGC TGCTGCTGGG CTTCAACACG CTGCTCAGTG GTGCGCCGCT GATGCTGCAC
GCCGCGCTGG TACTCACTGC CTGGGTGTTG CTCAGCGGCG GCCTGCATCT GGACGGTCTG
GCCGACAGTG CTGACGCCTG GCTGGGCGGC TTCGGTGACC GTGAACGCAC CTTGAAGATC
ATGAAAGACC CACGCAGCGG GCCTATCGCC GTGGTCACGC TGGTCCTGGT GCTGCTGCTC
AAGTTTGCTG CGATTCTGGC GCTGATCGAG AGCCATGCCA GCGTCTGGCT GCTGTTGGCA
CCGGTGATCG GGCGCGCGGC CATGCTTGGG CTGTTTCTGG GGACGCCGTA TGTGCGTTCC
GGCGGGCTGG GGCAGGCGTT GGCCGATCAC CTGCCGCGCG GCCCTGGACG CAAGGTTTTG
CTCGCCACCG CCATTGCGTG CGTGCTGCTC GCCGGCTGGT CGGGGGTAGC CGTATTGCTG
GTCTGCGCCG TCTGTTTCTT CTGGCTGCGG CAACTGATGA TGCGCCGTCT GGGCGGATGC
ACCGGTGATA CAGCCGGGGC ATTGCTCGAG CTGCTGGAGT TGGCGGTGCT GCTGACGCTG
GCGCTGCTTT GA
 
Protein sequence
MLPFWIALQF LGSLPIRLPG MPSPEELGRS LLFYPLVGAV FGTLLLGFNT LLSGAPLMLH 
AALVLTAWVL LSGGLHLDGL ADSADAWLGG FGDRERTLKI MKDPRSGPIA VVTLVLVLLL
KFAAILALIE SHASVWLLLA PVIGRAAMLG LFLGTPYVRS GGLGQALADH LPRGPGRKVL
LATAIACVLL AGWSGVAVLL VCAVCFFWLR QLMMRRLGGC TGDTAGALLE LLELAVLLTL
ALL