Gene Psyr_3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3646 
Symbol 
ID3369181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand- 
Start bp4329247 
End bp4330332 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content60% 
IMG OID637654005 
Productphosphoserine aminotransferase 
Protein accessionYP_236716 
Protein GI66046875 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01364] phosphoserine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.153815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC GAGCCTTTAA CTTCTGCGCA GGTCCTGCTG CGCTTCCTGA AGCTGTTCTG 
CTGCGTGCCC AGGCGGAACT CCTCGACTGG CACGGCAAAG GCCTTTCCGT CATGGAAATG 
AGCCACCGCA GTGATGAGTT CGTCTCCATT GCCACCAAGG CCGAGCAGGA TCTGCGTGAC 
CTGCTGTCCA TTCCTTCGAA TTACAAGGTG TTGTTCCTGC AAGGCGGTGC CAGCCAGCAG 
TTCGCCCAGA TTGCGCTGAA CCTGCTGCCT GAAAATGGCA AGGCCGATTA CATCGACACC 
GGCATCTGGT CGCAGAAGGC TATCGACGAG GCGTCGCGCT ACGGCGCAAT CAACGTCGCG 
GCCAGCGCCA AGGCCTACGA TTACTTTGCC ATTCCCGGCC AGAACGAGTG GAAGCTGTCC 
AAGGACGCGG CTTACGTCCA CTACGCGCCG AACGAAACCA TTGGCGGCCT GGAATTCAAC 
TGGATTCCGG AAACCGGCGA CGTGCCCCTG GTGGCCGACA TGTCTTCGGA CATCCTCTCG 
CGTCCGCTGG ATATCTCGCG TTTCGGCATG ATTTACGCCG GCGCCCAGAA GAACATCGGC 
CCCAGCGGCA TCGTGGTGGT GATCATTCGC GAAGACCTGC TGGGCCGCGC TCGCTCGCTG 
TGCCCGACCA TGCTCGACTA CAAGGTCGCG GCCGACAATG GTTCGATGTA CAACACGCCG 
CCGACCCTGG CCTGGTACCT GTCCGGGCTG GTCTTCGAAT GGCTGAAAGA GCAGGGCGGT 
GTCGAAGCGA TCGGCAAGCG CAACGAAATC AAGCAGCGCA CGCTGTATGA CTTCATCGAC 
GCCAGCGAGC TGTACAGCAA CCCGATCAAC AAGCCTGATC GTTCGTGGAT GAACGTCCCG 
TTCCGTCTGG CTGACGATCG TCTCGACAAG CCGTTCCTGG CCGGTGCCGA TGCAAACGGC 
CTGCTCAACC TCAAGGGCCA TCGTTCGGTA GGCGGCATGC GTGCATCCAT CTACAACGCG 
ATCGATATCA ACGCCATCAA CGCGCTGGTG GCCTACATGA AAGACTTCGA GAAGGAGCAC 
GGCTGA
 
Protein sequence
MSKRAFNFCA GPAALPEAVL LRAQAELLDW HGKGLSVMEM SHRSDEFVSI ATKAEQDLRD 
LLSIPSNYKV LFLQGGASQQ FAQIALNLLP ENGKADYIDT GIWSQKAIDE ASRYGAINVA 
ASAKAYDYFA IPGQNEWKLS KDAAYVHYAP NETIGGLEFN WIPETGDVPL VADMSSDILS 
RPLDISRFGM IYAGAQKNIG PSGIVVVIIR EDLLGRARSL CPTMLDYKVA ADNGSMYNTP 
PTLAWYLSGL VFEWLKEQGG VEAIGKRNEI KQRTLYDFID ASELYSNPIN KPDRSWMNVP 
FRLADDRLDK PFLAGADANG LLNLKGHRSV GGMRASIYNA IDINAINALV AYMKDFEKEH 
G