| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3642 |
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| Symbol | rpsA |
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| ID | 3369177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4323992 |
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| End bp | 4325683 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637654001 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_236712 |
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| Protein GI | 66046871 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0546866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.793215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA GCTTTGCAGA ACTTTTTGAA GAAAGCCTAA AGACCCTCAA CCTTCAGGCC
GGTTCGATCA TCACCGCGAT CATCGTTGAT ATCGACTACC AGGCAGGTTG GGTTACGGTT
CACGCCGGTC TGAAATCTGA AGGCCTCATC CCGCTGGAAC AGTTCCACAA CGACGCTGGC
GAGCTGACCA TCAAGATCGG TGATGAAGTT CACGTTGCGC TGGACGCGGT CGAAGATGGC
TTTGGCGAAA CCAAGCTGTC CCGCGAAAAA GCCAAGCGTG CCGAGTGCTG GATCGTTCTG
GAAGCGGCTT TCGCAGCTGA AGAAGTGGTC AAGGGCGTTA TCAACGGTAA GGTTAAAGGC
GGCTTCACTG TCGACGTTAA CGGCATCCGT GCGTTCCTGC CTGGTTCTCT GGTTGACGTC
CGCCCTGTGC GTGACACGAC TCACCTGGAA GGCAAAGAGC TCGAGTTCAA GGTCATCAAG
CTGGACCAGA AGCGCAACAA CGTTGTCGTT TCCCGTCGCA GTGTCCTGGA AGCCGAGAAC
AGTGCCGAGC GCGAAGCTCT GCTCGAGTCC CTGCAGGAAG GTCAGCAAGT CAAGGGTATC
GTCAAGAACC TCACCGATTA CGGCGCATTC GTCGATCTGG GTGGCGTCGA TGGCCTGCTG
CACATCACCG ACATGGCCTG GAAGCGTATC AAGCATCCAT CGGAAATCGT CAACGTTGGC
GACGAGATCG ATGTCAAGGT CCTGAAGTAC GATCGCGAGC GCAATCGTGT TTCCCTGGGT
CTGAAGCAAC TGGGTGAAGA TCCATGGGTT GCTATCAAGG CTCGCTACCC GGAAAGCACC
CGCGTTACCG CGCGTGTGAC CAACCTGACC GACTACGGCT GCTTCGCAGA GCTGGAAGAA
GGCGTGGAAG GCCTGGTACA CGTTTCCGAA ATGGACTGGA CCAACAAGAA CATCCACCCT
TCGAAAGTCG TTCAGGTTGG CGACGAAGTG GAAGTCATGG TTCTGGACAT CGACGAAGAG
CGTCGTCGTA TTTCCCTCGG CATCAAACAG TGCAAATCCA ACCCATGGGA AGATTTCTCT
GGCCAGTTCA ACAAGGGCGA TAAAATCTCC GGCACCATCA AGTCGATCAC CGATTTCGGT
ATCTTCATTG GTCTGGACGG CGGCATCGAC GGTCTGGTTC ACCTGTCCGA CATCTCCTGG
AACGAAGTGG GCGAAGAAGC CGTACGTCGC TTCAAGAAGG GCGACGAGCT CGACACTGTG
ATCCTGTCGG TTGATCCTGA GCGTGAGCGT ATCTCGCTGG GTATCAAGCA GCTGGAAAGC
GATCCGTTCT CCGAGTACGT CACTGTCAAT GACAAGGGCG CCATCGTTCG CGGTATCGTT
AAAGAAGTTG ACGCCAAAGG CGCCATCATC ACTCTGGCCG ACGACATCGA AGCGACCCTC
AAGGCTTCCG AAATCAGCCG TGACCGCGTT GAAGACGCGC GTAACGTTCT GAAGGAAGGC
GAAGAGATCG AAGCCAAGAT CATCAGCGTT GACCGCAAGA GCCGCGTAAT CAGCTTGTCC
ATCAAGTCGA AAGACGTTGA AGACGAGAAA GAAGCGATCC AGAGCCTGCG TAGCAAGCCT
GAAGTCGCTG AAAGCACTGG TCCTACCACT ATTGGTGACC TGTTGCGCGC GCAAATGGAA
AAACAGAACT AA
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| Protein sequence | MSESFAELFE ESLKTLNLQA GSIITAIIVD IDYQAGWVTV HAGLKSEGLI PLEQFHNDAG
ELTIKIGDEV HVALDAVEDG FGETKLSREK AKRAECWIVL EAAFAAEEVV KGVINGKVKG
GFTVDVNGIR AFLPGSLVDV RPVRDTTHLE GKELEFKVIK LDQKRNNVVV SRRSVLEAEN
SAEREALLES LQEGQQVKGI VKNLTDYGAF VDLGGVDGLL HITDMAWKRI KHPSEIVNVG
DEIDVKVLKY DRERNRVSLG LKQLGEDPWV AIKARYPEST RVTARVTNLT DYGCFAELEE
GVEGLVHVSE MDWTNKNIHP SKVVQVGDEV EVMVLDIDEE RRRISLGIKQ CKSNPWEDFS
GQFNKGDKIS GTIKSITDFG IFIGLDGGID GLVHLSDISW NEVGEEAVRR FKKGDELDTV
ILSVDPERER ISLGIKQLES DPFSEYVTVN DKGAIVRGIV KEVDAKGAII TLADDIEATL
KASEISRDRV EDARNVLKEG EEIEAKIISV DRKSRVISLS IKSKDVEDEK EAIQSLRSKP
EVAESTGPTT IGDLLRAQME KQN
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