Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3638 |
Symbol | |
ID | 3369173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4320070 |
End bp | 4321050 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637653997 |
Product | UDP-glucose 4-epimerase, putative |
Protein accession | YP_236708 |
Protein GI | 66046867 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.407013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGTG ATGTTGCATT GGTTGCAATA ACAGGTGCGA CAGGTTTCGT GGGCAGTGCC GTGGTTCGTC GGCTGATCGA GCGCACAGGC TGTTCTGTGA GGGTTGCAGT CCGGGGCGCT TATGTCGTTT CCAGCCCGCG CATCGATGTT GTCAGTGCAC AATCACTGGC ACCGGATAAT CAATGGGCAA GCTTTGTAAC CGGCGCGGAT GTGGTGATTC ATTGTGCTGC GCGAGTTCAT GTGCTCAATG AGACCGCCGA CGCACCGGAT CAGGAGTACT TTCGCGCCAA TGTCACCGCA ACCCTGAATC TGGCCGAGCA GGCCGCAGCG GCAGGCGTCA AGCGCTTCAT CTTTATCAGT TCCATCAAGG CCAATGGCGA GTCTACGCTT GCGGGTGCGC CATTCACGGC CAGCGACCCG TGCACTCCGC TGGATGCCTA CGGCGTGTCA AAACACAGGG CTGAGGAGGG CTTGCGCGAG TTGTCTGCCC GCACCGGTAT GCAGGTGGTG ATCATTCGAC CGGTGCTGGT CTACGGTCCG GGGGTCAAGG CTAATTTCAG AAGCATGATG CGCTGGCTGG ACAAAGGGCT GCCGTTGCCG CTCGGGTCCA TCGATAATCG CAGAAGCCTG GTGGCGGTGG ATAATCTGGC AGATCTGGTG ACGGTCTGTG TCGATCATCC TGCTGCGGCT GACCAGACGT TTCTGGTCAG TGACGGGGAC GATCTGTCCA CGTCCAGGCT GCTGCGCGAA ATGGGCAAGG CCTTGGGCAA ACCTGCCCGG CTGCTGCCGG TGCCGGCCTC GCTGTTGAAA GCGGCTGCAG CACTGTTGGG CAAGAAAGCT TTTTCACAAC GGCTGTGCAA CTCGCTGCAG GTCGATATCA GTAAAACCTG TACGATGCTG GATTGGCATC CACCTGTGAG TATTGAACAC GCCATGCAGG ACACTGCTCG ATATTATCTG GAACACGACA AGCATGATTG A
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Protein sequence | MSGDVALVAI TGATGFVGSA VVRRLIERTG CSVRVAVRGA YVVSSPRIDV VSAQSLAPDN QWASFVTGAD VVIHCAARVH VLNETADAPD QEYFRANVTA TLNLAEQAAA AGVKRFIFIS SIKANGESTL AGAPFTASDP CTPLDAYGVS KHRAEEGLRE LSARTGMQVV IIRPVLVYGP GVKANFRSMM RWLDKGLPLP LGSIDNRRSL VAVDNLADLV TVCVDHPAAA DQTFLVSDGD DLSTSRLLRE MGKALGKPAR LLPVPASLLK AAAALLGKKA FSQRLCNSLQ VDISKTCTML DWHPPVSIEH AMQDTARYYL EHDKHD
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