Gene Psyr_3638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3638 
Symbol 
ID3369173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4320070 
End bp4321050 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content58% 
IMG OID637653997 
ProductUDP-glucose 4-epimerase, putative 
Protein accessionYP_236708 
Protein GI66046867 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.407013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTG ATGTTGCATT GGTTGCAATA ACAGGTGCGA CAGGTTTCGT GGGCAGTGCC 
GTGGTTCGTC GGCTGATCGA GCGCACAGGC TGTTCTGTGA GGGTTGCAGT CCGGGGCGCT
TATGTCGTTT CCAGCCCGCG CATCGATGTT GTCAGTGCAC AATCACTGGC ACCGGATAAT
CAATGGGCAA GCTTTGTAAC CGGCGCGGAT GTGGTGATTC ATTGTGCTGC GCGAGTTCAT
GTGCTCAATG AGACCGCCGA CGCACCGGAT CAGGAGTACT TTCGCGCCAA TGTCACCGCA
ACCCTGAATC TGGCCGAGCA GGCCGCAGCG GCAGGCGTCA AGCGCTTCAT CTTTATCAGT
TCCATCAAGG CCAATGGCGA GTCTACGCTT GCGGGTGCGC CATTCACGGC CAGCGACCCG
TGCACTCCGC TGGATGCCTA CGGCGTGTCA AAACACAGGG CTGAGGAGGG CTTGCGCGAG
TTGTCTGCCC GCACCGGTAT GCAGGTGGTG ATCATTCGAC CGGTGCTGGT CTACGGTCCG
GGGGTCAAGG CTAATTTCAG AAGCATGATG CGCTGGCTGG ACAAAGGGCT GCCGTTGCCG
CTCGGGTCCA TCGATAATCG CAGAAGCCTG GTGGCGGTGG ATAATCTGGC AGATCTGGTG
ACGGTCTGTG TCGATCATCC TGCTGCGGCT GACCAGACGT TTCTGGTCAG TGACGGGGAC
GATCTGTCCA CGTCCAGGCT GCTGCGCGAA ATGGGCAAGG CCTTGGGCAA ACCTGCCCGG
CTGCTGCCGG TGCCGGCCTC GCTGTTGAAA GCGGCTGCAG CACTGTTGGG CAAGAAAGCT
TTTTCACAAC GGCTGTGCAA CTCGCTGCAG GTCGATATCA GTAAAACCTG TACGATGCTG
GATTGGCATC CACCTGTGAG TATTGAACAC GCCATGCAGG ACACTGCTCG ATATTATCTG
GAACACGACA AGCATGATTG A
 
Protein sequence
MSGDVALVAI TGATGFVGSA VVRRLIERTG CSVRVAVRGA YVVSSPRIDV VSAQSLAPDN 
QWASFVTGAD VVIHCAARVH VLNETADAPD QEYFRANVTA TLNLAEQAAA AGVKRFIFIS
SIKANGESTL AGAPFTASDP CTPLDAYGVS KHRAEEGLRE LSARTGMQVV IIRPVLVYGP
GVKANFRSMM RWLDKGLPLP LGSIDNRRSL VAVDNLADLV TVCVDHPAAA DQTFLVSDGD
DLSTSRLLRE MGKALGKPAR LLPVPASLLK AAAALLGKKA FSQRLCNSLQ VDISKTCTML
DWHPPVSIEH AMQDTARYYL EHDKHD