| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3636 |
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| Symbol | |
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| ID | 3369171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4316968 |
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| End bp | 4318962 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637653995 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_236706 |
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| Protein GI | 66046865 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.49195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGGT TGCGGGCCAG GTTACTGGCT CTACCACGCC GCAAAAAACG AATAATTCAG
GTTGCTGCCG ACGTTATTCT GGTCTGGCTG GCTCTGTGGA TGGCGTTTGT CGTACGACTG
GGTATCGATG AGCTGATCAA TCCTCTCGAG AAGCACACCT GGCTGTTCAT CAGTGCGCCT
GTTGCGGCTA TCCCGCTGTT CATCCGGTTC GGCATGTACC GCGCAGTGAT GCGCTATTTC
GGCAATGATG CGCTGATTGC CATCATCAAG GCCGTCACGA TGTCGTCGTT GATCCTTGGT
TGTATGGTTT ACGTTTACAG TAATCACCAG CAATTGGTCC CGCGCTCGGT GATCTTCAAT
TACTGGTGGC TGAGCATGGT CATGATTGGC GGTCTGCGAC TGGCCATGCG GCAGTACTTT
CTCGGCGACT GGTTCGCTGC AGCGCAGCAC GTGCCCTTCG CCAAGAGCGA CAACGGTTTG
CAGAAGGTCG CCATTTACGG CGCTGGTGCT GCGGGAAACC AGTTGGTCGC TGCATTGCGC
ATGGGGCGTC TGATGCATCC GGTGGCGTTC ATCGATGATG ATGAGTCGAT TTCCAACCGG
GTCATTTCCG GCCTTCAGGT CTACAAACCG CGAAACATCC AGCGAATGAT AGATTCCACG
GGGGCTCAGG AAATCCTGTT GGCAATCCCG TCATCGTCGC GTGGGCGACG TCGGGAAATC
CTCGGTTTTC TGGAAGGCTT TCCGCTGCAC GTACGAAGCG TTCCGGGTTT CATGGACCTG
GCCGCTGGCA GGGTCAAGGT CGACGACCTT CAGGAAGTCG ACATCGCAGA CCTTCTGGGG
CGTGATGCAG TCCCGGCCCG CGATAACCTG CTTGAGCACT GCATCAAGGG CAAAACGGTG
CTGGTGACCG GCGCAGGCGG CTCGATCGGT TCTGAACTGT GCCGACAGAT ACTGCTGCTG
AAACCTACCC AGTTACTGTT GCTGGACCAT AGCGAGTTCA ATCTCTACAG CATTCTCTCC
GAGCTTGAAC AGCGCTCGGC TCGCGAGTCA CTCTCGGTTA AATTGCTGCC CATACTCGGT
TCGGTGCGCA ACCACCCCAA ACTGCTGTCG ATCATGAAAA CCTGGAAAGT CGACACGGTC
TATCACGCTG CGGCCTACAA GCATGTGCCG ATGGTCGAGC ACAATATTGC CGAAGGCGTC
ATCAACAATG TCGTGGGTAC GCTCAATACC GCCCAGGCGG CGTTGCAGGC AGGGGTGTCC
AACTTTGTCC TGATCTCCAC AGACAAGGCG GTCCGCCCGA CCAATGTGAT GGGCAGCACC
AAACGCCTCG CCGAATTGAT ATTGCAGGCA CTGAGCCGCG AAACCGCGCC AGTGATCTTC
GGTGACAAGG CCAATGTCTA TCAGGTCAAC AAGACCCGCT TTACCATGGT TCGCTTCGGC
AACGTGCTGG GCTCGTCCGG TTCGGTGATT CCGCTGTTCC ACAAGCAGAT CCAGTCAGGC
GGGCCGCTGA CGGTGACGCA TCCCAAGATC ACCCGCTATT TCATGACCAT CCCCGAAGCC
GCTCAGTTGG TCATTCAGGC GGGCTCCATG GGGCATGGCG GCGACGTTTT CGTTCTCGAT
ATGGGTGAGC CGGTCAAGAT TGTCGAACTG GCCGAGAAGA TGATCCACCT GTCCGGTCTG
GCCATTCGCT CGGAGAAAAA CCCGCACGGT GATATCTCCA TCGAGTTCAC CGGGCTGCGT
CCTGGCGAAA AACTCTATGA AGAGCTGTTG ATCGGCGACA ACGTGGTTGC CACCGAGCAC
CCGATGATCA TGAGTGCAAA CGAAGATTGC CTGCCGTGGG ATGTATTGAA AGGCCGCCTG
ACAAAACTGC TGGATGCGGT CGACCGCGAC GATTACACCA GCGTGCGTCA GTTGCTGCGC
GAAACGGTAA ACGGTTATAC GCCAGAGGGT GAAATCGTTG ACTGGATGTA TCAGGAACGC
AGCGGCGAAA CGTGA
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| Protein sequence | MSRLRARLLA LPRRKKRIIQ VAADVILVWL ALWMAFVVRL GIDELINPLE KHTWLFISAP
VAAIPLFIRF GMYRAVMRYF GNDALIAIIK AVTMSSLILG CMVYVYSNHQ QLVPRSVIFN
YWWLSMVMIG GLRLAMRQYF LGDWFAAAQH VPFAKSDNGL QKVAIYGAGA AGNQLVAALR
MGRLMHPVAF IDDDESISNR VISGLQVYKP RNIQRMIDST GAQEILLAIP SSSRGRRREI
LGFLEGFPLH VRSVPGFMDL AAGRVKVDDL QEVDIADLLG RDAVPARDNL LEHCIKGKTV
LVTGAGGSIG SELCRQILLL KPTQLLLLDH SEFNLYSILS ELEQRSARES LSVKLLPILG
SVRNHPKLLS IMKTWKVDTV YHAAAYKHVP MVEHNIAEGV INNVVGTLNT AQAALQAGVS
NFVLISTDKA VRPTNVMGST KRLAELILQA LSRETAPVIF GDKANVYQVN KTRFTMVRFG
NVLGSSGSVI PLFHKQIQSG GPLTVTHPKI TRYFMTIPEA AQLVIQAGSM GHGGDVFVLD
MGEPVKIVEL AEKMIHLSGL AIRSEKNPHG DISIEFTGLR PGEKLYEELL IGDNVVATEH
PMIMSANEDC LPWDVLKGRL TKLLDAVDRD DYTSVRQLLR ETVNGYTPEG EIVDWMYQER
SGET
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