Gene Psyr_3625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3625 
Symbol 
ID3369160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4308644 
End bp4309375 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content62% 
IMG OID637653984 
Producthypothetical protein 
Protein accessionYP_236695 
Protein GI66046854 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000130147 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.281396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTGT TGCTGGGTGC AGCGATGGGC ACCCTGGGAG GGTTGTTCGG CATCGGTGGT 
GGTCTTGTGG CAATTCCCGC GCTCGGGGTG CTGTTCGGTC TGGATCAGCA ACTGGCTCAA
GGGACCGCCT TGCTGATGGT GCTACCGAAT GTGTTGCTGG CCTTGTGGCG TTACAACCAG
CGCAACCGGA TTCTGCTGCG TAATGCGCTG ATGTTGATCA TCCCCAGTTT CATTTTTGCC
TGGCTGACCT CGCTGCTCGC GGTTCGCATC GACCCGCAAG GCATGCGCCT GGGCTTCGTC
GGTTTTCTGG TGGTGCTGAC GGTGTTCAAT GTCGCGCAGA TGTATTGGCG CAGCACGCAG
GCCACTGGCG GGTTGCGTCA TGAAAAGTGG TTATGGCTGC TGGGCGTCGG CTCCGGCGTG
ACCGGTGGTC TGTTTGGCGT CGGCGGCGGG GTAGTGGCGA CGCCGATCCT CACCAGTGTC
TTCGGCGCGA CCCAGGTCGT GGCTCAGGGG CTTGCGCTGT CCCTGGCGGC GCCGAGCACC
GGTATCACGC TGGTCACCTA TGCGTTGCAC GATCACGTCA ACTGGTCGAT GGGCATTCCG
CTGGCCATCG GCGGCCTGGC CAGCATCAGC TGGGGCGTGA AGTTGGCGCA TTCGTTGCCG
GAGCGCACCC TGCGCCTGAT GTTCTGCGTG TTTCTGGTGC TCTGTGCGGT CATTCTCGCG
CTCAAGGTTT GA
 
Protein sequence
MFVLLGAAMG TLGGLFGIGG GLVAIPALGV LFGLDQQLAQ GTALLMVLPN VLLALWRYNQ 
RNRILLRNAL MLIIPSFIFA WLTSLLAVRI DPQGMRLGFV GFLVVLTVFN VAQMYWRSTQ
ATGGLRHEKW LWLLGVGSGV TGGLFGVGGG VVATPILTSV FGATQVVAQG LALSLAAPST
GITLVTYALH DHVNWSMGIP LAIGGLASIS WGVKLAHSLP ERTLRLMFCV FLVLCAVILA
LKV