Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3621 |
Symbol | |
ID | 3369156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4305167 |
End bp | 4305928 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653980 |
Product | hypothetical protein |
Protein accession | YP_236691 |
Protein GI | 66046850 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.29946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAAG AGCGTGAGCG CGTAGAGCGA ATCCTGGCCG AGGTGCACGA CGACTTCGGC ATGATTCGCG TGCTGGAAGT GGAGGATTAC CGCTTTCTGG AGTTTGGCGA TGCCATCGAG CAAAGCTGCA CCTTTACAGC CGATCCGAGC TGGCTGGAGT ACGACTACAC CCGCGCGATG CTGATCGGCG CGCTGTGCCA TGACGCGCCG GAAAGCGCGC TGTTTCTGGG CCTGGGGGCC GGTACGCTGA CTCAGGCCTG CATGAAGTTC CTGCCCCTCG AGGATGTGGA AGTCATCGAG CTGCGCCCGG ATGTGCCACG TCTGGCCATG GAGTTCATGG GGCTCGACGA CGATCCGCGA CTGTATATCC GCATCGGCGA TGCGCTGGAC CTGCTGGACA GTGCCGAGCC TGCCGACCTG ATCTTTGTCG ACCTGTACAC CGATGTCGGG CCTGGGGTCG GGCACCTGGC CTGGAATTTC CTGCAGAGCT GTCAGCAGCG GCTGAATCCG GGCGGCTGGC TGATCATCAA TCAGTGGGCG ACCGACGACG GCAAGCCGCT GGGAGCGGCG CTGCTGCGTG GCCTTTACCA CCGCCATTAC TGGGAGCTGC CGGTGAAGGA GGGCAACGTC ATCCTGCTCG TCCCGGCCGA CCTGGAGCAG ACACTGGATA TCGACGCGTT GAACGGACGA GCCGAGGCAC TTGCGCCGCA TCTGGGTTAC TCGCTTGCGT CGCTGATCAA GGCTATTCGT TCCGCCACCT GA
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Protein sequence | MTEERERVER ILAEVHDDFG MIRVLEVEDY RFLEFGDAIE QSCTFTADPS WLEYDYTRAM LIGALCHDAP ESALFLGLGA GTLTQACMKF LPLEDVEVIE LRPDVPRLAM EFMGLDDDPR LYIRIGDALD LLDSAEPADL IFVDLYTDVG PGVGHLAWNF LQSCQQRLNP GGWLIINQWA TDDGKPLGAA LLRGLYHRHY WELPVKEGNV ILLVPADLEQ TLDIDALNGR AEALAPHLGY SLASLIKAIR SAT
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