Gene Psyr_3621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3621 
Symbol 
ID3369156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4305167 
End bp4305928 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content63% 
IMG OID637653980 
Producthypothetical protein 
Protein accessionYP_236691 
Protein GI66046850 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.29946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAG AGCGTGAGCG CGTAGAGCGA ATCCTGGCCG AGGTGCACGA CGACTTCGGC 
ATGATTCGCG TGCTGGAAGT GGAGGATTAC CGCTTTCTGG AGTTTGGCGA TGCCATCGAG
CAAAGCTGCA CCTTTACAGC CGATCCGAGC TGGCTGGAGT ACGACTACAC CCGCGCGATG
CTGATCGGCG CGCTGTGCCA TGACGCGCCG GAAAGCGCGC TGTTTCTGGG CCTGGGGGCC
GGTACGCTGA CTCAGGCCTG CATGAAGTTC CTGCCCCTCG AGGATGTGGA AGTCATCGAG
CTGCGCCCGG ATGTGCCACG TCTGGCCATG GAGTTCATGG GGCTCGACGA CGATCCGCGA
CTGTATATCC GCATCGGCGA TGCGCTGGAC CTGCTGGACA GTGCCGAGCC TGCCGACCTG
ATCTTTGTCG ACCTGTACAC CGATGTCGGG CCTGGGGTCG GGCACCTGGC CTGGAATTTC
CTGCAGAGCT GTCAGCAGCG GCTGAATCCG GGCGGCTGGC TGATCATCAA TCAGTGGGCG
ACCGACGACG GCAAGCCGCT GGGAGCGGCG CTGCTGCGTG GCCTTTACCA CCGCCATTAC
TGGGAGCTGC CGGTGAAGGA GGGCAACGTC ATCCTGCTCG TCCCGGCCGA CCTGGAGCAG
ACACTGGATA TCGACGCGTT GAACGGACGA GCCGAGGCAC TTGCGCCGCA TCTGGGTTAC
TCGCTTGCGT CGCTGATCAA GGCTATTCGT TCCGCCACCT GA
 
Protein sequence
MTEERERVER ILAEVHDDFG MIRVLEVEDY RFLEFGDAIE QSCTFTADPS WLEYDYTRAM 
LIGALCHDAP ESALFLGLGA GTLTQACMKF LPLEDVEVIE LRPDVPRLAM EFMGLDDDPR
LYIRIGDALD LLDSAEPADL IFVDLYTDVG PGVGHLAWNF LQSCQQRLNP GGWLIINQWA
TDDGKPLGAA LLRGLYHRHY WELPVKEGNV ILLVPADLEQ TLDIDALNGR AEALAPHLGY
SLASLIKAIR SAT