Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3618 |
Symbol | |
ID | 3369153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4302182 |
End bp | 4302949 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653977 |
Product | catalytic LigB subunit of aromatic ring-opening dioxygenase |
Protein accession | YP_236688 |
Protein GI | 66046847 |
COG category | [S] Function unknown |
COG ID | [COG3384] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.461583 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCCCA GCCTGTTTAT TTCCCATGGC TCCCCCATGC TGGCGCTGGA ACCCGGTGAC AGCGGCCCGG CTCTGAAGCG ACTGGCTGCC AGCCTGCCAC GGCCTCGCGC CATCGTGATG GTCTCTGCCC ACTGGGAAAG CCACGAACTG ATCGTCAACG GCAATCCACA GCCCGAGACA TGGCATGACT TCGGCGGCTT TCCACCCGAA CTGTTTGCAG TGCAGTACCC GGCGCAAGGG CTGCCGGAAC TGACCCGCAC GGCGGTAGAT CTGCTTGCCG CCAGCGACCT GCCTGCACGC ATCGACAGCA GACGTCCCTT CGACCACGGC GTCTGGGTGC CGTTGTCGCT GATGTACCCG AACGCCGACA TTCCGGTGGT GCAGGTTTCA CTGCCCAGCC GCCAGGGACC TGAACTGCAG ACCCGCGTGG GCCGGGCACT GGCCAGCTTG CGTGAACAGG GTGTACTGAT CATCGGTTCA GGCAGCATCA CGCATAACCT GCGTGACCTT GACTGGAACG CCGGACCCGA CAGCATCGAG CCTTGGGCTG CCGCGTTTCG TGACTGGATG ATCGATAAGC TGCAAAACGA CGACGAAGCC GCACTGCACC ACTACCGCAG CCTTGCTCCT CACGCAGCCC GTGCGCACCC CAGTGACGAG CACCTGCTGC CGCTGTATTT TGCGCGCGGC GCTGGCGGTG TCTTCGGCAT TGCCCATCAG GGCTTCACCA TGGGCGCGCT CGGGATGGAT ATCTATCGGT TCGGGTGA
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Protein sequence | MFPSLFISHG SPMLALEPGD SGPALKRLAA SLPRPRAIVM VSAHWESHEL IVNGNPQPET WHDFGGFPPE LFAVQYPAQG LPELTRTAVD LLAASDLPAR IDSRRPFDHG VWVPLSLMYP NADIPVVQVS LPSRQGPELQ TRVGRALASL REQGVLIIGS GSITHNLRDL DWNAGPDSIE PWAAAFRDWM IDKLQNDDEA ALHHYRSLAP HAARAHPSDE HLLPLYFARG AGGVFGIAHQ GFTMGALGMD IYRFG
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