Gene Psyr_3613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3613 
Symbol 
ID3369148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4297779 
End bp4298264 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content59% 
IMG OID637653972 
Productglutathione peroxidase 
Protein accessionYP_236683 
Protein GI66046842 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.374005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.319321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAA ACCTGCTGAG CATCCCGGTC ACGACGATCA AGGGCGAACA GAAAACCCTC 
GCCGATTTCT CCGGCAAGGC GCTGCTGGTG GTTAACACCG CCAGCCAGTG TGGCTTTACC
CCTCAATACA AGGGCCTGGA AAAGCTCTGG CAGGACTATA GGGATCAGGG CTTGGTGGTG
CTGGGTTTCC CCTGTAACCA GTTCGGCAAG CAGGAGCCAG GCGACGAGGG GGCGATTTCC
GGCTTTTGCG AGCTGAACTA CGGCGTCAGC TTCCCGTTGT TCAAGAAGAT CGATGTGAAC
GGCGAGCAGG CCCATCCGCT GTTCGTGCAG CTCAAGCAGC AGGCGCCGGG GTTGTTGGGC
ACGGAGCGCA TCAAGTGGAA TTTCACCAAG TTCCTGATTG GCCAGGACGG TCGGCTGGTC
AAGCGTTTTG CGCCATTGAC CAAGCCTGAG GAACTGACGG GCGAGATCGA GGCGCTGCTG
CGCTGA
 
Protein sequence
MSENLLSIPV TTIKGEQKTL ADFSGKALLV VNTASQCGFT PQYKGLEKLW QDYRDQGLVV 
LGFPCNQFGK QEPGDEGAIS GFCELNYGVS FPLFKKIDVN GEQAHPLFVQ LKQQAPGLLG
TERIKWNFTK FLIGQDGRLV KRFAPLTKPE ELTGEIEALL R