Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3608 |
Symbol | |
ID | 3369139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4291591 |
End bp | 4292313 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637653963 |
Product | Pirin, N-terminal |
Protein accession | YP_236678 |
Protein GI | 66046837 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.694898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.724404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACTC TTCGCAAAGC CTCTGATCGT GGCGCAGCCG ATCATGGCTG GTTGAAATCC TTTCACACCT TTTCCTTTGC CGGCTACCGC AACCCGCAGG AACAAGGCTT TTCCGACCTG CTGGTGATCA ACGACGACCG TGTCAGTGCA GGCAAAGGTT TCGGCCAGCA TCCTCACCGG GACATGGAGA TCTTTTCCTA TGTGCTGGAA GGCGCGCTGG AACACAAGGA TACGCTGGGC ACCGGCTCGG TGATTCGTCC CGGTGACGTG CAATTGATGA GCGCCGGCAC CGGTGTGGCA CACAGCGAGT TCAACCATTC GCACACCGAG GGCGTGCATT TTCTGCAGAT CTGGATCGTG CCGAATGTTG CAGGCGCGGC GCCCAACTAC CAGGAGAAGC ACTTTAGCCC CGAGCAGAAA CGCGGTCGCT TGCAGTTGAT CATTTCGCCG GAAGGCGAGA ACGGTGCGCT CAAGGTGCGC CAGGACGCTC GGGTGTATGC CGGCCTGTTC GATGGCGATG AAACCGCGAC GCTGGAGCTG GCGGCCAACC GCTACGCCTA CGTGCACGTT GCGCGTGGCA GCGTGGTGCT CAATGGCGAG CAACTGGGCG AAGGGGATGG CGTGCGTGTC CGCGACGAAC AGACGCTGAG CCTGAGCGCA GGGGTTGACG CAGAGGTGTT GGTGTTCGAC ATGCGGCCAA ACGAATTGCC GCAGATGCCT TGA
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Protein sequence | MLTLRKASDR GAADHGWLKS FHTFSFAGYR NPQEQGFSDL LVINDDRVSA GKGFGQHPHR DMEIFSYVLE GALEHKDTLG TGSVIRPGDV QLMSAGTGVA HSEFNHSHTE GVHFLQIWIV PNVAGAAPNY QEKHFSPEQK RGRLQLIISP EGENGALKVR QDARVYAGLF DGDETATLEL AANRYAYVHV ARGSVVLNGE QLGEGDGVRV RDEQTLSLSA GVDAEVLVFD MRPNELPQMP
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