Gene Psyr_3608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3608 
Symbol 
ID3369139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4291591 
End bp4292313 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content60% 
IMG OID637653963 
ProductPirin, N-terminal 
Protein accessionYP_236678 
Protein GI66046837 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.694898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.724404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTC TTCGCAAAGC CTCTGATCGT GGCGCAGCCG ATCATGGCTG GTTGAAATCC 
TTTCACACCT TTTCCTTTGC CGGCTACCGC AACCCGCAGG AACAAGGCTT TTCCGACCTG
CTGGTGATCA ACGACGACCG TGTCAGTGCA GGCAAAGGTT TCGGCCAGCA TCCTCACCGG
GACATGGAGA TCTTTTCCTA TGTGCTGGAA GGCGCGCTGG AACACAAGGA TACGCTGGGC
ACCGGCTCGG TGATTCGTCC CGGTGACGTG CAATTGATGA GCGCCGGCAC CGGTGTGGCA
CACAGCGAGT TCAACCATTC GCACACCGAG GGCGTGCATT TTCTGCAGAT CTGGATCGTG
CCGAATGTTG CAGGCGCGGC GCCCAACTAC CAGGAGAAGC ACTTTAGCCC CGAGCAGAAA
CGCGGTCGCT TGCAGTTGAT CATTTCGCCG GAAGGCGAGA ACGGTGCGCT CAAGGTGCGC
CAGGACGCTC GGGTGTATGC CGGCCTGTTC GATGGCGATG AAACCGCGAC GCTGGAGCTG
GCGGCCAACC GCTACGCCTA CGTGCACGTT GCGCGTGGCA GCGTGGTGCT CAATGGCGAG
CAACTGGGCG AAGGGGATGG CGTGCGTGTC CGCGACGAAC AGACGCTGAG CCTGAGCGCA
GGGGTTGACG CAGAGGTGTT GGTGTTCGAC ATGCGGCCAA ACGAATTGCC GCAGATGCCT
TGA
 
Protein sequence
MLTLRKASDR GAADHGWLKS FHTFSFAGYR NPQEQGFSDL LVINDDRVSA GKGFGQHPHR 
DMEIFSYVLE GALEHKDTLG TGSVIRPGDV QLMSAGTGVA HSEFNHSHTE GVHFLQIWIV
PNVAGAAPNY QEKHFSPEQK RGRLQLIISP EGENGALKVR QDARVYAGLF DGDETATLEL
AANRYAYVHV ARGSVVLNGE QLGEGDGVRV RDEQTLSLSA GVDAEVLVFD MRPNELPQMP