| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3606 |
|---|
| Symbol | |
|---|
| ID | 3369137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4289388 |
|---|
| End bp | 4290359 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637653961 |
|---|
| Product | ABC transporter, substrate-binding protein, aliphatic sulphonates |
|---|
| Protein accession | YP_236676 |
|---|
| Protein GI | 66046835 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.331945 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCAACGA CCCTCGTCCT CTGGAGCCAA CGCTTGCTGA AGGGGCTGGC GCTGAGCCTG
GTGGCCTCGC TCAATACCCA GGCGGCCAAT CTGATCGTCG GCGATCAGAG TTACAGCGCC
CGCACCGTGA TGGAAGCCGC CGGGGTGCTC GAAGACTTAC CTTACGAACT GGAATGGAAG
CAGTTCACCG CAGGCTCGCC GGTCGCCGAG GCCCTGAACG TCGGCAGCCT GGATATTGGC
TTGCTGGGTG ATTCGCCTGC GCTGTTCATG GGCGCGCTGG GGGCTCCGAT CAAGGTCATC
GGTGTGTCGC GACAGAACCT CGACGGCGTT GCCATCGTTG TGCGCAAGGA CTCGCCGATC
AAGACCGTGG CGGATCTGGC GGGCAAGAAA GTCGCCATCT GGAAAGGTTC GTTCAGCCAG
CAACTGATGC TCACCGCACT GGACAAGGCC GGTGTCGCCC GCGACGCCGT TGACTATCGC
TACCTCAGCG CACTGGATTC CTCCCACGCG CTGGACGGCG GTTCGGTGGA TGCGATTGCT
ACCTGGGAAC CCTACGTCAC TCAACAGGAA CGACAGGGCG CGCGGATTAT CGCGACGGCC
GAGGGCTTGA TTCCTGCGCA AAGCTTCATC GTCGCCAACG ATCAGGCCAT CAAGGACAAG
CGTGCGCAGA TCAGCGATTT CCTGCAACGC CTGCAGGCCG CCCGCGCCTG GTCGGTCAGC
GATCCGCAAC ACAATGAACG CTACGCCAAC GCCTGGTCCG CGCTGACCAA GGCCGATGCC
GAGGTAGCAC GGCGCTGGTT TTCCCGCGCC CAGGTGGTGG TCGTACCGAT CACTGCGCAA
GTGGTGGCCG GTGCGCAGCA GACCATCGAT TTTTTCAACA ACGCGGGGCT GACCAAGCGT
TATCCTGCTG CCAGTGTGTT TGACGAGTCG TTCAGTGCAG CGCTGGCCGA TCAGGCGCAA
GCAGTACGCT GA
|
|---|
| Protein sequence | MPTTLVLWSQ RLLKGLALSL VASLNTQAAN LIVGDQSYSA RTVMEAAGVL EDLPYELEWK
QFTAGSPVAE ALNVGSLDIG LLGDSPALFM GALGAPIKVI GVSRQNLDGV AIVVRKDSPI
KTVADLAGKK VAIWKGSFSQ QLMLTALDKA GVARDAVDYR YLSALDSSHA LDGGSVDAIA
TWEPYVTQQE RQGARIIATA EGLIPAQSFI VANDQAIKDK RAQISDFLQR LQAARAWSVS
DPQHNERYAN AWSALTKADA EVARRWFSRA QVVVVPITAQ VVAGAQQTID FFNNAGLTKR
YPAASVFDES FSAALADQAQ AVR
|
|---|
| |