Gene Psyr_3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3597 
Symbol 
ID3369128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4278248 
End bp4279072 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content65% 
IMG OID637653952 
ProductABC transporter 
Protein accessionYP_236667 
Protein GI66046826 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.284861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTC CTGATCTGCG CAACACTCCA TCCGTGTCTC CCGAGGCGGG GCAGGCGCCT 
GTACAACTGC GCAACGTGGT GCGTCAGTTT GGCCGGCAAC GGGTCATCGA CGGGCTGAAT
CTGGACATTG CTCCAGGTGA ATTTGTCGCC TTGCTCGGCG CCAGTGGCTC CGGCAAGACC
ACCTTGCTGC GCACCCTGGC CGGGCTGGAC GAGATCGACA GCGGCGAACT GCGTGTGCCG
GTGGCACGTG CGGCGGTGTT TCAGGAACCG CGCCTGATGC CGTGGAAAAG CGCCTGGAAG
AACGTGGTTC TCGGCTTGCG TATCAACGAT GCCAAGGCTC GGGCCGAAGC GGCGTTGACC
GAGGTTGGCC TGGCGCATCG GCTGAATGCC TTTCCGGCCA CCTTGTCCGG CGGCGAAGCG
CAGCGTGTGG CACTGGCGCG AGGGCTGGTC CGTGAGCCAA AACTGTTGCT GCTCGACGAG
CCTTTTGCCG CACTCGATGC GTTGACGCGC ATTCGCATGC ATCAACTGAT CATCGACCTG
TGGCGCAAAC ACACCCCGGC GGTGCTGCTG GTGACACACG ATGTCGATGA GGCGATCCTG
CTCGCTGACC GGGTCATCGT GCTGGCCGAC GGCAGGATTG CCGACGGCAT CCGCGTCGAC
CTGCCGCGCC AGCGCGACAG CGGGCAGGCC GGGTTTCAGC TGATTCGCAG CCGCTTGCTG
GGCTTGCTGG GCGTCAAGGT GCACGCGGCT GTCGATAGCG CACCGCAAGC GCCAGAACAG
GACGTGACCC TCAGCGCATT GCGCCGCTTC GCCAACGCTC GTTGA
 
Protein sequence
MATPDLRNTP SVSPEAGQAP VQLRNVVRQF GRQRVIDGLN LDIAPGEFVA LLGASGSGKT 
TLLRTLAGLD EIDSGELRVP VARAAVFQEP RLMPWKSAWK NVVLGLRIND AKARAEAALT
EVGLAHRLNA FPATLSGGEA QRVALARGLV REPKLLLLDE PFAALDALTR IRMHQLIIDL
WRKHTPAVLL VTHDVDEAIL LADRVIVLAD GRIADGIRVD LPRQRDSGQA GFQLIRSRLL
GLLGVKVHAA VDSAPQAPEQ DVTLSALRRF ANAR