Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3597 |
Symbol | |
ID | 3369128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4278248 |
End bp | 4279072 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637653952 |
Product | ABC transporter |
Protein accession | YP_236667 |
Protein GI | 66046826 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.284861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACTC CTGATCTGCG CAACACTCCA TCCGTGTCTC CCGAGGCGGG GCAGGCGCCT GTACAACTGC GCAACGTGGT GCGTCAGTTT GGCCGGCAAC GGGTCATCGA CGGGCTGAAT CTGGACATTG CTCCAGGTGA ATTTGTCGCC TTGCTCGGCG CCAGTGGCTC CGGCAAGACC ACCTTGCTGC GCACCCTGGC CGGGCTGGAC GAGATCGACA GCGGCGAACT GCGTGTGCCG GTGGCACGTG CGGCGGTGTT TCAGGAACCG CGCCTGATGC CGTGGAAAAG CGCCTGGAAG AACGTGGTTC TCGGCTTGCG TATCAACGAT GCCAAGGCTC GGGCCGAAGC GGCGTTGACC GAGGTTGGCC TGGCGCATCG GCTGAATGCC TTTCCGGCCA CCTTGTCCGG CGGCGAAGCG CAGCGTGTGG CACTGGCGCG AGGGCTGGTC CGTGAGCCAA AACTGTTGCT GCTCGACGAG CCTTTTGCCG CACTCGATGC GTTGACGCGC ATTCGCATGC ATCAACTGAT CATCGACCTG TGGCGCAAAC ACACCCCGGC GGTGCTGCTG GTGACACACG ATGTCGATGA GGCGATCCTG CTCGCTGACC GGGTCATCGT GCTGGCCGAC GGCAGGATTG CCGACGGCAT CCGCGTCGAC CTGCCGCGCC AGCGCGACAG CGGGCAGGCC GGGTTTCAGC TGATTCGCAG CCGCTTGCTG GGCTTGCTGG GCGTCAAGGT GCACGCGGCT GTCGATAGCG CACCGCAAGC GCCAGAACAG GACGTGACCC TCAGCGCATT GCGCCGCTTC GCCAACGCTC GTTGA
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Protein sequence | MATPDLRNTP SVSPEAGQAP VQLRNVVRQF GRQRVIDGLN LDIAPGEFVA LLGASGSGKT TLLRTLAGLD EIDSGELRVP VARAAVFQEP RLMPWKSAWK NVVLGLRIND AKARAEAALT EVGLAHRLNA FPATLSGGEA QRVALARGLV REPKLLLLDE PFAALDALTR IRMHQLIIDL WRKHTPAVLL VTHDVDEAIL LADRVIVLAD GRIADGIRVD LPRQRDSGQA GFQLIRSRLL GLLGVKVHAA VDSAPQAPEQ DVTLSALRRF ANAR
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