| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3584 |
|---|
| Symbol | |
|---|
| ID | 3369115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4267318 |
|---|
| End bp | 4268136 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637653939 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_236654 |
|---|
| Protein GI | 66046813 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1354] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.169624 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCG TCGAGTCGGT GGACAGCCAG GCAGACGCCC AGCAGGAACT GCCGTTCGCG
CTGGTCTATG GGCGTGCTGT CACGCAGATG CCGCTGGACC TGTACATCCC GCCCGACGCG
CTGGAGGTTT TTCTCGAAGC GTTCGAAGGG CCGCTCGACC TGCTGCTGTA CCTGATCCGT
AAACAGAACA TCGACATCCT CGATATTCCC GTGGCCGAGA TCACCAAGCA GTACATGGGT
TACGTCGAGC TGATGAAAAC CGTGCGGCTG GAGCTGGCTG CCGAGTATCT GGTCATGGCC
GCCATGCTGG CCGAGATCAA ATCGCGCATG CTGTTGCCGC GTTCGGCGGA AGTCGAAGAG
GAAGAAGGCG ATCCGCGCGC CGAGCTGATT CGCCGCTTGC AGGAATACGA GCGCTTCAAG
GCGGCCGCCG AGGGCATCGA TGGCCTGAGC CGGGTGGGGC GCGATGTCAT CGTGCCAAAA
CTGGACGCTC CCGAAGCCCG TGCACGCAAG TTGCTGCCGG ATGTCAGTCT TGAAGAAGTG
CTGATGTCGA TGGCTGAAGT GCTGCACCGC GGCGACATGT TCGAAAGCCA CCAGGTCAGC
CGCGAGGCAC TGTCCACCCG CGAGCGCATG AGCGATGTGC TGGAACGTCT CAAGGGCGGC
GGTTTTGTGC CGTTCGCCGA GCTGTTCACT GCCGAAGAAG GGCGTCTGGG TGTGGTCGTG
ACGTTTATGG CGGTGCTTGA GCTGGTCAAG GAATCCCTTG TCGAGCTGGT CCAAAACGAG
CCCTTTGCGG CGATCCATGT CCGGGCGCGA GCCGAGTAG
|
|---|
| Protein sequence | MTAVESVDSQ ADAQQELPFA LVYGRAVTQM PLDLYIPPDA LEVFLEAFEG PLDLLLYLIR
KQNIDILDIP VAEITKQYMG YVELMKTVRL ELAAEYLVMA AMLAEIKSRM LLPRSAEVEE
EEGDPRAELI RRLQEYERFK AAAEGIDGLS RVGRDVIVPK LDAPEARARK LLPDVSLEEV
LMSMAEVLHR GDMFESHQVS REALSTRERM SDVLERLKGG GFVPFAELFT AEEGRLGVVV
TFMAVLELVK ESLVELVQNE PFAAIHVRAR AE
|
|---|
| |