Gene Psyr_3583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3583 
Symbol 
ID3369114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4266535 
End bp4267302 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID637653938 
Producthypothetical protein 
Protein accessionYP_236653 
Protein GI66046812 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.809895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.416711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCA ACGAACCTCG CGAACTGGCC CCGTTGCTTG AAGCATTTCT GCTGGCCTCC 
GGAAAACCGC AGACGCTGGA GCGGCTGTAT GAGCTGTTCG AGGAAGGCGA GCGCCCTGAA
CCTCCGGTGT TCAAAAAGGC GCTCGAGGTG TTGCGCAAGT CCTGTGAGGG GCGCGCCTTC
GAACTCAAGG AAGTGGCGTC GGGTTATCGT CTGCAGATTC GTGACCGCTT TTCGCCGTGG
GTCGGGCGGT TGTGGGAAGA GCGGCCGCAG CGTTACTCCC GGGCCATGCT GGAAACCCTC
GCGCTGATCG CTTACCGCCA GCCGATCACG CGGGGCGAGA TCGAAGATGT GCGCGGTGTT
GCGGTCAACA GCCACATCGT CAAGACCCTG CTCGAGCGCG AGTGGATTCG CGTGGTGGGC
TACCGTGATG TGCCCGGCAA ACCGGCCATG TTCGCGACCA CCAAGGGCTT TCTCGACCAC
TTCAACCTCA AAAGCCTCGA CGAACTGCCG CCGCTGGCCG ACCTGCGCGA GATGGAAACC
GAGCCAGTGC TGGATTTCGA AGAGGCGCCG GTGCCTGCGC ACCTGCAAGC CCTGGCCGAC
GCCAGCCTCG ACCCGGACGC AGAGCCCGAA GCCCCGCGTG ACGAAACCAG CTTCCGCAGC
CTGCTGGTGG AACTGGACTC GATGGAGCAG GGCCTCAAGA CCGACTTCGA CGACCTGCTG
CGCGCGGAGC CAGAGCCTGA AGACGACAAA GGCGACGATG AGGTCTGA
 
Protein sequence
MNLNEPRELA PLLEAFLLAS GKPQTLERLY ELFEEGERPE PPVFKKALEV LRKSCEGRAF 
ELKEVASGYR LQIRDRFSPW VGRLWEERPQ RYSRAMLETL ALIAYRQPIT RGEIEDVRGV
AVNSHIVKTL LEREWIRVVG YRDVPGKPAM FATTKGFLDH FNLKSLDELP PLADLREMET
EPVLDFEEAP VPAHLQALAD ASLDPDAEPE APRDETSFRS LLVELDSMEQ GLKTDFDDLL
RAEPEPEDDK GDDEV