Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3583 |
Symbol | |
ID | 3369114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4266535 |
End bp | 4267302 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653938 |
Product | hypothetical protein |
Protein accession | YP_236653 |
Protein GI | 66046812 |
COG category | [K] Transcription |
COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.809895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.416711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTCA ACGAACCTCG CGAACTGGCC CCGTTGCTTG AAGCATTTCT GCTGGCCTCC GGAAAACCGC AGACGCTGGA GCGGCTGTAT GAGCTGTTCG AGGAAGGCGA GCGCCCTGAA CCTCCGGTGT TCAAAAAGGC GCTCGAGGTG TTGCGCAAGT CCTGTGAGGG GCGCGCCTTC GAACTCAAGG AAGTGGCGTC GGGTTATCGT CTGCAGATTC GTGACCGCTT TTCGCCGTGG GTCGGGCGGT TGTGGGAAGA GCGGCCGCAG CGTTACTCCC GGGCCATGCT GGAAACCCTC GCGCTGATCG CTTACCGCCA GCCGATCACG CGGGGCGAGA TCGAAGATGT GCGCGGTGTT GCGGTCAACA GCCACATCGT CAAGACCCTG CTCGAGCGCG AGTGGATTCG CGTGGTGGGC TACCGTGATG TGCCCGGCAA ACCGGCCATG TTCGCGACCA CCAAGGGCTT TCTCGACCAC TTCAACCTCA AAAGCCTCGA CGAACTGCCG CCGCTGGCCG ACCTGCGCGA GATGGAAACC GAGCCAGTGC TGGATTTCGA AGAGGCGCCG GTGCCTGCGC ACCTGCAAGC CCTGGCCGAC GCCAGCCTCG ACCCGGACGC AGAGCCCGAA GCCCCGCGTG ACGAAACCAG CTTCCGCAGC CTGCTGGTGG AACTGGACTC GATGGAGCAG GGCCTCAAGA CCGACTTCGA CGACCTGCTG CGCGCGGAGC CAGAGCCTGA AGACGACAAA GGCGACGATG AGGTCTGA
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Protein sequence | MNLNEPRELA PLLEAFLLAS GKPQTLERLY ELFEEGERPE PPVFKKALEV LRKSCEGRAF ELKEVASGYR LQIRDRFSPW VGRLWEERPQ RYSRAMLETL ALIAYRQPIT RGEIEDVRGV AVNSHIVKTL LEREWIRVVG YRDVPGKPAM FATTKGFLDH FNLKSLDELP PLADLREMET EPVLDFEEAP VPAHLQALAD ASLDPDAEPE APRDETSFRS LLVELDSMEQ GLKTDFDDLL RAEPEPEDDK GDDEV
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