| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3581 |
|---|
| Symbol | |
|---|
| ID | 3369112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4264625 |
|---|
| End bp | 4265854 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637653936 |
|---|
| Product | pseudouridine synthase, Rsu |
|---|
| Protein accession | YP_236651 |
|---|
| Protein GI | 66046810 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA AAGACAAGCA GGACAGCCAG GAAATCGGAC CCGCAGGCGA AAAGCTGCAG
AAGGTTCTGG CGCGCATTGG CGTGGGTTCA CGCCGCGACG TGGAAGCCTG GATTACCCAA
GGCCGTATCA AGGTCAACGG CAAGGACGCG ACCCTCGGTC AACGCGTCGA CCTGCATGAC
GCCATCAGTG TCGATGGTCG CGTCATCAAG CGCGAAGAAG CGGCCGAAAC GGTCCGTCGC
GTCATCATGT ACAACAAGCC CGATGGTGAA ATCTGCACCC GTGACGACCC TGAAGGCCGT
CCGACCGTGT TTGATCGTCT GCCGCGCCCG AAAGAAGGCC GCTGGATCAA CATCGGTCGT
CTCGACATCA ATACCACCGG CCTGCTGATG TTCACCACCG ACGGTGAACT CGCCAACCGC
CTGATGCACC CGTCGTTTGA AATGGACCGT GAATACGCGG TTCGCGTGCG TGGCGAAGTC
GATGACGACA TGCTGCTGCG CCTCAAGAAC GGTGTGATTC TCGAAGACGG TCCTGCGCGC
TTCACCGATA TCCAGCAGGC ACCGGGCGGC GAAGGCTTCA ACCACTGGTA TCACTGCGTG
GTGATGGAAG GCCGCAACCG CGAAGTACGT CGTCTCTGGG AATCCCAGGG GCTGGTGGTC
AGCCGCCTGA AGCGCGTGCG TTACGGGCCG GTGTTCCTCA ACTCCGACCT GCCGATGGGC
CGCTGGCGCG AAATGAGCCA GTACGAAGTC GATATTCTGG CCGCTGAAGT CGGTCTGCAA
CCTGTGGCCC AGCCGCAGAT GAATGCCAAG ACCAAGGACA AGATGGAGCG TCTGCAGCGT
CAATCGTCGC GCCCTCTGGG CAAAGGCGAG CGCGTTCGCA CCTTGCGTCC GGCTGCTGGT
GCTCCGGCGA CCGGCGGCGA GCGCGCGCCG CGTCAGCCGC AGATCACCGG CAGCGAGCGT
GATCGTCCGC GCGGTGGCGA TTCGACTCAG CGTCCTTCGC CGCGCAAGGA TTCGGGCAAG
CCCGGTTCGC GCGCGCCGCG TCCGGCCGAC AACAGCCGTG GCACGCCGGT CGCCGAGCGT
CCGAGCGACA TGAACAAGCG TCCGGCCAAG CCGGGCCCCA AGCGTGTCGG CATCAAGCTG
GTCAACGATG ATGCGCCGTC AGGCAAGCGT CGTGGCCCAC CGGCAGGTTC AGGTCAGCGT
CCGGGCTTCG GTCGTCGCAA GCCCGAGTGA
|
|---|
| Protein sequence | MSEKDKQDSQ EIGPAGEKLQ KVLARIGVGS RRDVEAWITQ GRIKVNGKDA TLGQRVDLHD
AISVDGRVIK REEAAETVRR VIMYNKPDGE ICTRDDPEGR PTVFDRLPRP KEGRWINIGR
LDINTTGLLM FTTDGELANR LMHPSFEMDR EYAVRVRGEV DDDMLLRLKN GVILEDGPAR
FTDIQQAPGG EGFNHWYHCV VMEGRNREVR RLWESQGLVV SRLKRVRYGP VFLNSDLPMG
RWREMSQYEV DILAAEVGLQ PVAQPQMNAK TKDKMERLQR QSSRPLGKGE RVRTLRPAAG
APATGGERAP RQPQITGSER DRPRGGDSTQ RPSPRKDSGK PGSRAPRPAD NSRGTPVAER
PSDMNKRPAK PGPKRVGIKL VNDDAPSGKR RGPPAGSGQR PGFGRRKPE
|
|---|
| |