| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3580 |
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| Symbol | |
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| ID | 3369111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4262944 |
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| End bp | 4264353 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637653935 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_236650 |
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| Protein GI | 66046809 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.90045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAA CAACCTCACC CTCGGGCGAA CTGAAACGTG GCCTGAAGAA TCGACACATC
CAGTTGATCG CCCTGGGCGG TGCTATCGGA ACGGGCCTGT TTCTCGGCTC GGCGGGCGTG
CTGAAATCAG CCGGGCCGTC GATGATTCTC GGTTATGCCA TCTGTGGCTT CATCGCCTTC
ATGATCATGC GCCAGCTGGG CGAGATGATC GTCGAAGAGC CGGTCGCCGG CTCGTTCAGC
CACTTCGCCC ACAACTACTG GGGCGGTTTC GCCGGCTTTC TGTCGGGCTG GAATTGCTGG
CTGCTGTACA TCCTGGTCGG CATGTCCGAG CTGACTGCTG TCGGCAAATA CATCCATTAC
TGGTTGCCGG ACATCCCGGG CTGGGTATCC GCGGCAGCCT TCTTCGTGCT GATCAATGCC
ATCAACCTGA CCAACGTCAA GGTCTTCGGC GAGACCGAAT TCTGGTTCGC GATCATCAAG
GTGGTGGCGA TCATCGGCAT GATTGCGTTG GGCAGTTACA TGCTGGTCAG TGGCAGCGGT
GGCCCGCAGG CCTCGGTCAG CAACCTCTGG GAGCATGGCG GATTCTTTCC CAATGGTGTC
AGCGGTTTGG TGATGGCGCT GGCAATCATC ATGTTCTCCT TCGGCGGCCT GGAAATGCTC
GGTTTCACTG CTGCCGAAGC CGAACAGCCG AAGACCGTAA TTCCCAAGGC GATCAACCAG
GTCATCTACC GCATCCTGAT TTTCTACATC GGCGCGCTGG TGGTCCTGTT GTCACTGACG
CCGTGGGACA GCCTGCTGGC CAGCCTCAAT GCGTCTGGCG ATTCCTACAG CGGCAGCCCG
TTCGTGCAGG TGTTCTCGAT GCTGGGTAGC GACACGGCGG CGCACATCCT CAACTTTGTG
GTGCTGACGG CAGCGCTGTC GGTCTACAAC AGCGGCACCT ATTGCAACAG CCGCATGCTG
GTGGGCATGG CCGAGCAGGG TGATGCGCCC AGGGCGCTGG CCCAGGTCGA CAAACGCGGG
GTGCCGGTCA AGGCTATCTT CGCCTCTGCC GCCGTGACAC TGGTCGCGGT GCTGCTCAAT
TATTTCGTGC CGCAGCAGGC GCTGGAACTG TTGATGTCGC TGGTGGTGGC CACGCTGGTG
ATCAACTGGG CGATGATCAG CTACTCGCAC CTGAAATTCC GCCAGCACAT GAACCGCACC
GCACAAGTGC CGCTGTTCAA GGCGCTGTGG TATCCCTATG GCAACTACGT GTGCCTGGCC
TTCGTGGTGT TCATCCTCGG CATCATGCTG ATGATCCCCG GCATCCAGAT CTCGGTGTAT
GCGATCCCGG TGTGGCTGGC GGTGATGTGG GTCTGTTACC GGGCCAAAAA CAGGCGTAGC
GTTGTCGTGC CTGCCGAGTC TGGCAAATAG
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| Protein sequence | MSETTSPSGE LKRGLKNRHI QLIALGGAIG TGLFLGSAGV LKSAGPSMIL GYAICGFIAF
MIMRQLGEMI VEEPVAGSFS HFAHNYWGGF AGFLSGWNCW LLYILVGMSE LTAVGKYIHY
WLPDIPGWVS AAAFFVLINA INLTNVKVFG ETEFWFAIIK VVAIIGMIAL GSYMLVSGSG
GPQASVSNLW EHGGFFPNGV SGLVMALAII MFSFGGLEML GFTAAEAEQP KTVIPKAINQ
VIYRILIFYI GALVVLLSLT PWDSLLASLN ASGDSYSGSP FVQVFSMLGS DTAAHILNFV
VLTAALSVYN SGTYCNSRML VGMAEQGDAP RALAQVDKRG VPVKAIFASA AVTLVAVLLN
YFVPQQALEL LMSLVVATLV INWAMISYSH LKFRQHMNRT AQVPLFKALW YPYGNYVCLA
FVVFILGIML MIPGIQISVY AIPVWLAVMW VCYRAKNRRS VVVPAESGK
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