| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3579 |
|---|
| Symbol | |
|---|
| ID | 3369110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4262499 |
|---|
| End bp | 4262912 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637653934 |
|---|
| Product | peptidyl-tRNA hydrolase domain protein |
|---|
| Protein accession | YP_236649 |
|---|
| Protein GI | 66046808 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.440076 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGTGA TTTCCAACAA CGTTCATCTG CCCGACGCCG AGATCGAGTT GACCGCTATC
CGTGCCCAGG GCGCGGGTGG GCAGAACGTC AACAAGGTCT CCAGCGCCGT GCATTTGCGT
TTCGACATCA ACGCCTCGTC GCTGCCGCCG TTCTACAAGG AGCGGCTGCT GGCGTTGAGT
GACAGCCGGA TCACCAGCGA CGGCGTGATC GTGCTCAAGG CTCAGCAGTA TCGAACCCAG
GAGCAGAACC GTGCCGATGC CTTGCTGCGC CTGAGCGAGC TGATCGTCAA CGCGGCCAAG
GTCGAAAAGA AACGCCGCCC GACACGCCCG ACCCTCGGCT CCAAGACCCG GCGCCTGGAG
TCCAAGAGCA AGCGCGGCTC GATCAAGGCC GGACGCGGGA AAGTGGATTT CTGA
|
|---|
| Protein sequence | MLVISNNVHL PDAEIELTAI RAQGAGGQNV NKVSSAVHLR FDINASSLPP FYKERLLALS
DSRITSDGVI VLKAQQYRTQ EQNRADALLR LSELIVNAAK VEKKRRPTRP TLGSKTRRLE
SKSKRGSIKA GRGKVDF
|
|---|
| |