| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3562 |
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| Symbol | astD |
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| ID | 3369093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4242761 |
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| End bp | 4244227 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637653917 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_236632 |
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| Protein GI | 66046791 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGCC TTTACATCGC AGGTGTGTGG CAGGACGGGC AGGGTGAGGT GGTCAATTCG
CTGAACCCGG TGACCCAGCA GGTGCTGTGG TCCGGGCGTG GCGCGAGCGC CGCGCAGGTC
GAGCAGGCGG TGCAGGCGGC GCGTCAGGCA TTTCCCGGCT GGGCACTGCT GTCTCTGGAT
CAGCGCATCG CGGTACTGGA GGCCTTCGCT GCACGTCTCA AGCATCACGC CGACGCGCTG
GCGCAGTGCA TCGGTGAAGA AACCGGCAAA CCGTTGTGGG AGTCGGCGAC CGAAGTGACC
AGCATGGTCA ACAAGATTGC CATCTCGGTG CAGAGCTATC GCGAACGAAC CGGTGAAAAG
AGCGGGCCAC TGGGCGACGC CACTGCGGTA CTGCGCCACA AGCCGCACGG CGTGGTCGCC
GTGTTCGGCC CGTACAACTT TCCCGGGCAT CTGCCCAACG GGCATATCGT CCCGGCCTTG
CTGGCGGGCA ACGTGGTGCT GTTCAAACCC AGCGAACTGA CACCGAAAGT CGCTGAGCTG
ACCGTCAAGT GCTGGATCGA AGCCGGACTG CCTGCCGGGG TTCTGAACCT GCTGCAGGGC
GGTCGCGAAA CCGGTATCGC GCTGGCCGCC AATCCGGGTA TCGACGGCCT GTTCTTCACC
GGGTCGAGCC GCACCGGCAA TGCGCTGCAC CAGCAGTTCG CCGGTCGGCC GGACAAGATC
CTTGCGCTGG AAATGGGCGG TAACAATCCG TTGATCGTCG ATCAGGTTCA GGACATCGAT
GCCGCAGTGT ACACCATCAT TCAGTCGGCC TTCATTTCCG CAGGCCAGCG CTGCACCTGT
GCGCGTCGTC TGCTGGTGCC CGAAGGCGAC TGGGGTGATG CCCTGCTGGC ACGACTGGTT
GGGGTCAGCG CTACTATCGA AGCCGGGGCG TTCGATCAGC AGCCTGCGCC GTTTATGGGC
TCGGTGATTT CGCTGGAGGC TGCACGCGCC TTGCTCGACG CGCAGCGCAA TCTGCTCGCC
AACGGCGCGC TGACCCTGCT GGAAATGCGC CAGCCGCAGC CCGGCGCGGC ATTGCTGACG
CCTGGCATTA TCGATGTCAG TGCGGTGCCC GAGCGCCCCG ACGAAGAGCT GTTCGGCCCG
CTGCTGCAAG TCATCCGCTA CGCCGGTTTC GATGCCGCCA TCGCCGAAGC CAACGCCACC
CGGTATGGCC TGGCGGCAGG TCTGCTGTCT GACTCCGAAG CGCGTTACCA GCAGTTCTGG
CTGCACAGCC GTGCCGGGAT CGTCAACTGG AACAAGCCGT TGACCGGAGC CGCCAGCAGT
GCGCCGTTCG GCGGGGTAGG CGCCTCGGGC AACCACCGCG CCAGCGCCTA TTATGCGGCC
GATTACTGCG CCTATCCGGT GGCTTCGCTG GAGGCGGGCA GCCTGACGCT GCCTGCGACA
CTGACTCCCG GTATCAGGTT GAGCTGA
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| Protein sequence | MNSLYIAGVW QDGQGEVVNS LNPVTQQVLW SGRGASAAQV EQAVQAARQA FPGWALLSLD
QRIAVLEAFA ARLKHHADAL AQCIGEETGK PLWESATEVT SMVNKIAISV QSYRERTGEK
SGPLGDATAV LRHKPHGVVA VFGPYNFPGH LPNGHIVPAL LAGNVVLFKP SELTPKVAEL
TVKCWIEAGL PAGVLNLLQG GRETGIALAA NPGIDGLFFT GSSRTGNALH QQFAGRPDKI
LALEMGGNNP LIVDQVQDID AAVYTIIQSA FISAGQRCTC ARRLLVPEGD WGDALLARLV
GVSATIEAGA FDQQPAPFMG SVISLEAARA LLDAQRNLLA NGALTLLEMR QPQPGAALLT
PGIIDVSAVP ERPDEELFGP LLQVIRYAGF DAAIAEANAT RYGLAAGLLS DSEARYQQFW
LHSRAGIVNW NKPLTGAASS APFGGVGASG NHRASAYYAA DYCAYPVASL EAGSLTLPAT
LTPGIRLS
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