Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3556 |
Symbol | alaS |
ID | 3369087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4235102 |
End bp | 4237801 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637653911 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_236626 |
Protein GI | 66046785 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.118826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCCCT TTGCCGTCGC TACGTCATTT GACGTTTTGC ACTTGCCTCT GGCCGCAGTC TCCGTGGAAG AACCTATGAA AAGCGCAGAA ATCCGTGAAG CCTTCCTTGG CTTCTTCGAA GAGCAAGGCC ACACCCGTGT CGCTTCAAGC TCCTTGATTC CGGGCAATGA CCCAACCCTG CTGTTCACCA ACGCAGGCAT GAACCAGTTC AAGGATTGCT TCCTGGGCCA GGAAAAGCGT GCCTACACCC GCGCCGTTAC CAGTCAGAAA TGCGTGCGTG CAGGTGGCAA GCACAACGAC CTGGAAAACG TCGGCTATAC CGCTCGTCAC CATACTTTTT TCGAAATGCT GGGCAACTTC AGCTTCGGTG ACTATTTCAA GCGTGATGCC ATCACCTACG CCTGGACCTT CCTGACCTCC GAAAAATGGC TCAACCTGCC CAAGGAAAAA CTCTGGGTCA CGGTGTACGC CACTGACGAC GAAGCCTACG ACATCTGGAC CAAGGAGATC GGCGTGCCCG CCGAGCGCAT GGTCCGTATT GGCGACAACA AAGGCGCACC GTACGCCTCC GATAACTTCT GGACCATGGG TGATACCGGC CCGTGCGGTC CTTGCAGCGA GATTTTCTTC GATCACGGCC CGGAAATCTG GGGCGGCCCG CCAGGCTCGC CGGAAGAAGA CGGCGACCGT TACATCGAAA TCTGGAACAA CGTATTCATG CAGTTCAACC GGACTGCGGA TGGCGTGCTG CACCCGCTGC CGGCACCGTC GGTCGATACC GGCATGGGCC TGGAGCGTGT CAGTGCGGTG CTGCAGCACG TGCACTCCAA CTATGAAATC GATCTGTTCC AGAGCCTGCT GGCTGCGTCG GCCAAGGCCA TTGGTTGCAG CAATGACAAC CAGGCTTCGC TGAAAGTCGT GGCTGACCAC ATCCGTTCGT GCGGCTTCCT GATCGCCGAC GGCGTGCTGC CGTCCAACGA AGGGCGTGGT TATGTACTGC GCCGCATCAT TCGTCGCGCC TGCCGTCACG GCAACAAGCT GGGTGCCAAG GGCAGCTTCT TCTACCAGAT CGTTGCCGCG CTGGTTGCCG AGATGGGGTC TGCGTTCCCT GAGCTGGTGC AACAGCAGTC GCACATCGAA CGCGTGCTGA AAGGCGAAGA GGAGCAGTTC GCCAAGACCC TCGAGCAAGG TCTGAAAATT CTCGAGCAGG ATCTGGCCGA CCTCAAAGGC ACGGTGGTTC CGGGCGAAGT GGTGTTCAAG CTGTACGACA CCTACGGTTT CCCGATGGAC CTGACCGGTG ATATCGCCCG CGAGCGTAAC CTGACCCTCG ACGAAGCAGG CTTCGAGCGT GAAATGGACG CCCAGCGCGT GCGCGCCCGT TCGGCCAGCT CGTTCGGCAT GGATTACAAC AGCCTGGTCA AGGTCGATGT GGCCACGCAG TTTACCGGTT ACTCGGCGAC CACTGGCAGC GCCAGCGTCG TGGCCCTCTA TAAGGAAGGC CAGTCGGTTT CTCACCTGAA TGAAGGCGAA GAGGGCGTGG TGATTCTCGA CATCACCCCG TTCTACGCCG AGTCGGGCGG TCAGATCGGT GACAGCGGTT TCCTGCAGGC CGGTGACGCG CGCTTTGACG TCAGTGATAC CACCAAGACC GGCGGTGCGT TCCTGCACCA CGGCGTTGTG GCGTCCGGCA GCCTGAGCGT TGGCGCGCAG GTTGAAACAC AAGTGGCTGA TGAAGTTCGC GATGCAACCA AATTGAACCA TTCGGCCACT CACTTGCTGC ACGCCGCATT GCGTCAGGTG CTGGGTGAGC ACGTTCAGCA GAAAGGCTCG CTGGTCGACA GTCAGCGTCT GCGCTTCGAC TTCAGCCACT TCGAAGCGAT CAAGGCCGAG CAACTGCGCG CGCTGGAAGA TATCGTCAAC GCCGAAATTC GCAAGAACAC CGAGGTAATG ACCGAAGAAA CCGATATCGA CACGGCGAAG AAGAAGGGCG CCATGGCGCT GTTCGGCGAG AAGTACGGTG ACAGCGTTCG TGTGCTGAGC ATGGGCGGCG AGTTCTCCGT CGAGCTGTGC GGTGGCATTC ACGCCAGCCG TACCGGTGAC ATCGCGCTGT TCAAGATCGT CAGTGAGGGC GGTGTTGCAG CAGGCGTGCG CCGTATCGAG GCCGTCACCG GCGCTGCGGC CCTGGCCTGG CTGAATTCGG CCGAAGATCA ACTCAAGGAA GCCGCGACGC TGGTCAAAGG CAATCGCGAC AACCTGCTGG ACAAGCTGAC GGCGGTGATT GAACGCAACC GTCTGCTGGA AAAACAACTG GAACAACTGC AAGCCAAGGC AGCCAGTGCC GCCGGTGACG ACCTGTCGTC AGCGGCGCTG GATGTCAAAG GGGTCAAGGT TCTGGCCACG CGCCTGGATG GTCAGGACGG CAAGGCGCTG TTGGCGCTTG TCGATCAGTT GAAGAACAAG CTCGGCCGCG CAGTGATCCT GCTCGGCAGT GTTCATGAGG ACAAGGTTGT CTTGGTCGCA GGCGTGACCA AGGACCTGAC TGGCCAACTC AAAGCCGGTG ATTTGATGAA GCAGGCAGCT GCCGCCGTGG GTGGTAAAGG TGGTGGTCGT CCTGATATGG CTCAAGGCGG TGGTGTCGAT GCCGGTGCGC TGGATTCAGC GCTGGCACTG GCCGTTCCTT TTGTAGAGCA GGGTATCTGA
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Protein sequence | MRPFAVATSF DVLHLPLAAV SVEEPMKSAE IREAFLGFFE EQGHTRVASS SLIPGNDPTL LFTNAGMNQF KDCFLGQEKR AYTRAVTSQK CVRAGGKHND LENVGYTARH HTFFEMLGNF SFGDYFKRDA ITYAWTFLTS EKWLNLPKEK LWVTVYATDD EAYDIWTKEI GVPAERMVRI GDNKGAPYAS DNFWTMGDTG PCGPCSEIFF DHGPEIWGGP PGSPEEDGDR YIEIWNNVFM QFNRTADGVL HPLPAPSVDT GMGLERVSAV LQHVHSNYEI DLFQSLLAAS AKAIGCSNDN QASLKVVADH IRSCGFLIAD GVLPSNEGRG YVLRRIIRRA CRHGNKLGAK GSFFYQIVAA LVAEMGSAFP ELVQQQSHIE RVLKGEEEQF AKTLEQGLKI LEQDLADLKG TVVPGEVVFK LYDTYGFPMD LTGDIARERN LTLDEAGFER EMDAQRVRAR SASSFGMDYN SLVKVDVATQ FTGYSATTGS ASVVALYKEG QSVSHLNEGE EGVVILDITP FYAESGGQIG DSGFLQAGDA RFDVSDTTKT GGAFLHHGVV ASGSLSVGAQ VETQVADEVR DATKLNHSAT HLLHAALRQV LGEHVQQKGS LVDSQRLRFD FSHFEAIKAE QLRALEDIVN AEIRKNTEVM TEETDIDTAK KKGAMALFGE KYGDSVRVLS MGGEFSVELC GGIHASRTGD IALFKIVSEG GVAAGVRRIE AVTGAAALAW LNSAEDQLKE AATLVKGNRD NLLDKLTAVI ERNRLLEKQL EQLQAKAASA AGDDLSSAAL DVKGVKVLAT RLDGQDGKAL LALVDQLKNK LGRAVILLGS VHEDKVVLVA GVTKDLTGQL KAGDLMKQAA AAVGGKGGGR PDMAQGGGVD AGALDSALAL AVPFVEQGI
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