| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3549 |
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| Symbol | |
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| ID | 3369076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4226391 |
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| End bp | 4228802 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637653900 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_236619 |
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| Protein GI | 66046778 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.566467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.27975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCACG CTTCGCTGAA CCGTTTTCGT ACCGGGTTGC TCGCCTTGCT TTTGCTGTGC
GTGACCTTGC CGGCCCTGGC CCAGAATGCC CCCGCTCCCC AGGCCGATAG TGCCAGCAGC
GCAGCGCCTG CCGTGGAAGC CCCGAGCCTG GATGATCTGA ACCAACAGCT CGATCAGATC
CGTCAGAAAG TGACGGTCAG CGCCAACGAC GACCTGCTTT CAAGCCTGCG CCAGGCGGCT
TTGCAGGTCC AGAAACAAGC CGACAATCTG GTTGCGCAGC AGGCTGTCGA CATCGAACAC
CTGAATGATC AGCTCAACAT TCTCGGGCCG GTGCAACCGG ACGAAGCGCC AAGCCTGACC
AGTCAGCGCA AGACATTGAC CGCGCAGAAA AACGCGCTGG TCAATGATGA ACGGCAGACC
AATGAGCTAA GTCAGTCAGC CCGGGATCTG GCTACGCAGA TATTCAACCT GCGCCGCAGC
CTCTTCGATT CACAGATCAG CACGCGCACC GCGAGCCCGC TCAGTTCGGC ATTCTGGTCC
ACGCTGATTC GCCCGACCGA TGACGACCTG GGACGGTTGA ACAGGCTTCT GGTGGACGTA
CGCCAGGTAC TCAACAACGC GATGGCACCG GACAACCGTG TGCAATTCAT CAGCGTGGTG
CTGGGCGCGT TGTTCATCTG GGTGGTTGTC CGGCGCCTGC TGGAGCGCCT GCTGATCTGG
GCAATGATTC GCTGGCTGCC CGAAGGCCGT CTGCGCCGCA GTGCTCTGGC CCTGGCTGTC
GGGCTGTCGA CCATTCTCAC CATCACCATT GCCACTTCCT TGCTGCGCTG GGGGATCGTC
CACAACGCGG TACTCAGCAA CGACGTAGTC AATCTGCTCG ATCAGGTGCA GACGCTGATT
ACCTTCTGCG CCTTCATCGT CGGTCTGGGC CGTGCGCTGT TGATGCTGGC ACACGCCTCG
TGGCGCCTGC CGCAAATTCC TGACCAGATC GCCATCGCAT TGGGTCGCTT CCCCCCTGCC
CTGGCGCTGG CACTGATGGT CATCGGCACG CAGGAACGAA TCAACAGCGT GATTGCCAGC
AGCCTGGCCC TGACGGTTGC GGTCAATGGC CTGACGGCAC TGGCGGTTTC GCTGGTGTTC
TTCTATGCCC TGTTGCGCTA CCGCCGCACC CGCCGACGCT TTGAGCTGGA GCGCCCGGCG
GGCTTCGCCG GGCTGATTCC GTTTATCGTT GCGGTGTGGG TCGGCCTGAG TTTGCTGGCG
TTGTTGAGCG GCTACCTGAC GCTGGCGTAC TTTCTGGCAG TGAAACTGCT CTGGGTGAGC
GTGGTAGCGT CCACTGCATA CCTGCTGATC GCCTGCTTCG GTGACATCTG CGAAACCCTC
TTGTCGCCCA AGCAACCCGG CGGCCTGGCG CTGGGTTCCG CGCTGGGCTT GTCCACGCGC
CATCAGGCGC AGGCAAGTAC CGTGCTGGCC GGCATAGGCC GCACCTTGCT GCTGCTCACC
GCTGTACTGC TGGCGTTCCT GCCTTCAGGG TCGAGCCCGG GCGACCTGCT CGCCAGCTTT
ACTCAGCTGG ATGTCACCTC CAAATCCATG GGCAACCTGA ACATCGTCCC CGGCGACATT
CTGGTAGCAC TGGTGTGCCT GGTCGTCGGC CTGCTGAGCG TGCGTGTCCT CAAGGAGTGG
TTTGGAGAAC GCCTGCTGCC CGAAACCAAC ATGGACGCGG GCATGCAGGC CTCGCTGGTG
ACCCTGATCG GATACATCGG CTTTGTGCTG GTGGTGGCCG TGGTGATGTC CACACTCAAC
ATCAGCCTTA CCAACCTGAC CTGGGTGGTC AGTGCGCTGT CGGTGGGGAT AGGTTTCGGC
CTGCAAGCCA TTGTGCAGAA CTTCATCTCC GGCCTGATTC TGCTGACCGA GCGTCCGGTC
AAAGTCGGCG ACTGGGTAAG CCTGGCGGGG GTAGAAGGCG ATATTCGCCG GATCAACGTC
CGCGCGACCG AAATCCAGAT GGGCGACCGC TCGACAGTGA TCGTGCCGAA CTCGCAATTC
ATCACGCAGA ACGTGCGCAA CGTGACCATG GGCAACGCGC TGGGGGTGGT CGGAATCACC
CTTACCCTGC CCCTGGAAAC AGACGTTCTG CAAATACGCG AACTGCTGTT GCAGGCCTTC
ACCGAGCATG AAGCCATACT CGATGCGCCA GCGCCTTCAG TCACCTTCAA GGACTTGACC
AATACCGGTT TGATCATCAG CGCCAGCGGC TACGTGAACA GCCCACGCTC TGTGGGTGGC
GCACGGAGTG ATCTGTTGTT TACCGTTCTG GGGCGTCTGA GGGAATTGGG TGTTGCGCTG
TCTGCACCGC AGAGCATGGT GTTGATCAAT GAGGGGGCTG GGAAGGAGGC GGCGGCGGAG
GAGAGTCAGT GA
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| Protein sequence | MQHASLNRFR TGLLALLLLC VTLPALAQNA PAPQADSASS AAPAVEAPSL DDLNQQLDQI
RQKVTVSAND DLLSSLRQAA LQVQKQADNL VAQQAVDIEH LNDQLNILGP VQPDEAPSLT
SQRKTLTAQK NALVNDERQT NELSQSARDL ATQIFNLRRS LFDSQISTRT ASPLSSAFWS
TLIRPTDDDL GRLNRLLVDV RQVLNNAMAP DNRVQFISVV LGALFIWVVV RRLLERLLIW
AMIRWLPEGR LRRSALALAV GLSTILTITI ATSLLRWGIV HNAVLSNDVV NLLDQVQTLI
TFCAFIVGLG RALLMLAHAS WRLPQIPDQI AIALGRFPPA LALALMVIGT QERINSVIAS
SLALTVAVNG LTALAVSLVF FYALLRYRRT RRRFELERPA GFAGLIPFIV AVWVGLSLLA
LLSGYLTLAY FLAVKLLWVS VVASTAYLLI ACFGDICETL LSPKQPGGLA LGSALGLSTR
HQAQASTVLA GIGRTLLLLT AVLLAFLPSG SSPGDLLASF TQLDVTSKSM GNLNIVPGDI
LVALVCLVVG LLSVRVLKEW FGERLLPETN MDAGMQASLV TLIGYIGFVL VVAVVMSTLN
ISLTNLTWVV SALSVGIGFG LQAIVQNFIS GLILLTERPV KVGDWVSLAG VEGDIRRINV
RATEIQMGDR STVIVPNSQF ITQNVRNVTM GNALGVVGIT LTLPLETDVL QIRELLLQAF
TEHEAILDAP APSVTFKDLT NTGLIISASG YVNSPRSVGG ARSDLLFTVL GRLRELGVAL
SAPQSMVLIN EGAGKEAAAE ESQ
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