| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3547 |
|---|
| Symbol | |
|---|
| ID | 3369074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4224580 |
|---|
| End bp | 4225143 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637653898 |
|---|
| Product | regulatory protein, TetR |
|---|
| Protein accession | YP_236617 |
|---|
| Protein GI | 66046776 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.473445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.21056 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCA ACGCCCGTGA GGCGATCCTG CTTGCTGCGA GAAACATTGC CCAGTCGCAG
GGCTACAACG GCCTGAACTT TCGCGATCTG GCCGCTCAGG TCGGAATCAA GCCGGCCAGT
ATTTACTACC ACTTCCCCAG CAAGGCTGAT CTGGGTGTCG CGGTTGCCAG GCGATACTGG
CAGGATGGTG CCGCTGCACT CGAGACGATC TCCGCAGAAA CCCCCGATCC CGGCGAAGCG
TTACAGCGTT TCCCGGAAGT TTTCCGGCGT TCGCTGGAGG TTGAAAACCG CCTTTGCCTG
GGCACTTTCG TCGGCGCTGA AACCGACAAC CTGCCGCCTG AGATGACCGA GGAAATGCAG
CTATTCGCCC AGGTCAACAT TGCCTGGTTG AGCAAGCTTC TGGTGGCTGC GAAGGTTTGC
GCGCCCTCGG ACAGCGAGGT GCGGGCGCAG GCCATTTTTT CCGCTGTGGC GGGCGCTCAA
CTGGTTGCCA GAAGCAGGTC GGATATTTCC CTTTTTGACA CGTTGATCGA CACCTATCGT
GCCTGCGGGC CGCTGCCGGC CTAG
|
|---|
| Protein sequence | MTINAREAIL LAARNIAQSQ GYNGLNFRDL AAQVGIKPAS IYYHFPSKAD LGVAVARRYW
QDGAAALETI SAETPDPGEA LQRFPEVFRR SLEVENRLCL GTFVGAETDN LPPEMTEEMQ
LFAQVNIAWL SKLLVAAKVC APSDSEVRAQ AIFSAVAGAQ LVARSRSDIS LFDTLIDTYR
ACGPLPA
|
|---|
| |