Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3546 |
Symbol | |
ID | 3369073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4223650 |
End bp | 4224558 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653897 |
Product | helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal |
Protein accession | YP_236616 |
Protein GI | 66046775 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.137001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAATC AACTCAATGA ACTGCGGCTG CTCGCGGCCA AGGCTGAAAA TCGCCGTACT GAAACAGGCA TACCTCGTGT GGCCATGGTT CAAGGCAAAA TCCCCGAGCA TATGCTGGCA GCGGTCTACG ACCCGATGAT CAATGTGATC CTGCAAGGCA GCAAGCACAT GACCGTCGGT GACAGCACGC TCGAATATGA CCCGGCGACC TACTTCGTCA TGTCCATCGA CCTGCCTGCC GTGGGCTCGG TACACCCCGC CAGGTCCGGA GAACCCTATC TGGCGGTCAG CCTGACGCTG GATCCTGCGG TGTTATCCAC ACTGTTCGCC GACTTGCCCA AACCTGCCAG CCGCCTCGAG AACAGGCCCG GGTTTTCAGT GGCGCCGATG ACCACCGAAC TGATGGATGC GTGGGTGCGA ATGCTGCGCC TGATGGGCGA CCCGGACGCC ATCGCCGCGC TGGCGCCGGT CTACGAACGG GAGATTATCT TCCGGGTACT TCAAGGGCCT CATGGCTGGA TGCTCCGCGA GATCGCCGCA TCGGATACTG CGATGGCCAG AGTCAACATG TCGATCCAGT GGATCCGCCG CGACTTCGCT GAGCCGTTAG GCGTGGAGCG CCTGGCGGAA CGCGCGTCGA TGAGCGTTTC GGCGTTTCAT CGCCACTTCA AGGCCGTGAC CAACCTGAGC CCTTTGCAGT ACCAGAAGCG GGTACGCCTG CTGCACGCCA GAACGCTGAT GGTGGCCAAC GCCAAAAGTG TCATGGCGGC AGCCTTCGAG GTGGGCTATG AAAGCGCCAC GCAATTCAGT CGGGATTATT CGAGGGTGTT CGGACTTCCC CCGGCCCAGG ATGCCGGGCG GATCCTCGAG GCTACGAGGG GCGCGGCAGT TAATCAGCCT CTCGCCTGA
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Protein sequence | MDNQLNELRL LAAKAENRRT ETGIPRVAMV QGKIPEHMLA AVYDPMINVI LQGSKHMTVG DSTLEYDPAT YFVMSIDLPA VGSVHPARSG EPYLAVSLTL DPAVLSTLFA DLPKPASRLE NRPGFSVAPM TTELMDAWVR MLRLMGDPDA IAALAPVYER EIIFRVLQGP HGWMLREIAA SDTAMARVNM SIQWIRRDFA EPLGVERLAE RASMSVSAFH RHFKAVTNLS PLQYQKRVRL LHARTLMVAN AKSVMAAAFE VGYESATQFS RDYSRVFGLP PAQDAGRILE ATRGAAVNQP LA
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