Gene Psyr_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3546 
Symbol 
ID3369073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4223650 
End bp4224558 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content61% 
IMG OID637653897 
Producthelix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal 
Protein accessionYP_236616 
Protein GI66046775 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.137001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATC AACTCAATGA ACTGCGGCTG CTCGCGGCCA AGGCTGAAAA TCGCCGTACT 
GAAACAGGCA TACCTCGTGT GGCCATGGTT CAAGGCAAAA TCCCCGAGCA TATGCTGGCA
GCGGTCTACG ACCCGATGAT CAATGTGATC CTGCAAGGCA GCAAGCACAT GACCGTCGGT
GACAGCACGC TCGAATATGA CCCGGCGACC TACTTCGTCA TGTCCATCGA CCTGCCTGCC
GTGGGCTCGG TACACCCCGC CAGGTCCGGA GAACCCTATC TGGCGGTCAG CCTGACGCTG
GATCCTGCGG TGTTATCCAC ACTGTTCGCC GACTTGCCCA AACCTGCCAG CCGCCTCGAG
AACAGGCCCG GGTTTTCAGT GGCGCCGATG ACCACCGAAC TGATGGATGC GTGGGTGCGA
ATGCTGCGCC TGATGGGCGA CCCGGACGCC ATCGCCGCGC TGGCGCCGGT CTACGAACGG
GAGATTATCT TCCGGGTACT TCAAGGGCCT CATGGCTGGA TGCTCCGCGA GATCGCCGCA
TCGGATACTG CGATGGCCAG AGTCAACATG TCGATCCAGT GGATCCGCCG CGACTTCGCT
GAGCCGTTAG GCGTGGAGCG CCTGGCGGAA CGCGCGTCGA TGAGCGTTTC GGCGTTTCAT
CGCCACTTCA AGGCCGTGAC CAACCTGAGC CCTTTGCAGT ACCAGAAGCG GGTACGCCTG
CTGCACGCCA GAACGCTGAT GGTGGCCAAC GCCAAAAGTG TCATGGCGGC AGCCTTCGAG
GTGGGCTATG AAAGCGCCAC GCAATTCAGT CGGGATTATT CGAGGGTGTT CGGACTTCCC
CCGGCCCAGG ATGCCGGGCG GATCCTCGAG GCTACGAGGG GCGCGGCAGT TAATCAGCCT
CTCGCCTGA
 
Protein sequence
MDNQLNELRL LAAKAENRRT ETGIPRVAMV QGKIPEHMLA AVYDPMINVI LQGSKHMTVG 
DSTLEYDPAT YFVMSIDLPA VGSVHPARSG EPYLAVSLTL DPAVLSTLFA DLPKPASRLE
NRPGFSVAPM TTELMDAWVR MLRLMGDPDA IAALAPVYER EIIFRVLQGP HGWMLREIAA
SDTAMARVNM SIQWIRRDFA EPLGVERLAE RASMSVSAFH RHFKAVTNLS PLQYQKRVRL
LHARTLMVAN AKSVMAAAFE VGYESATQFS RDYSRVFGLP PAQDAGRILE ATRGAAVNQP
LA