| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3545 |
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| Symbol | |
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| ID | 3369072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4222768 |
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| End bp | 4223511 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637653896 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_236615 |
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| Protein GI | 66046774 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0725636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTCA TCGTAATCAC TGGCGGCAGC CGTGGCATCG GCGCAAGTGC AGCCGAACAC
GTGGCTCGAC GCGGGATGGG GGTCATCCTT ACCTACAACG CCAACCCGGA GGCCGCCGCA
ACGGTGGTCG AGCGTATCGC GCAGGCCGGT GGCAAGGCAG TTGCGCTCAG GCTGGATGTC
GCTGACGTCG GCAGCTTCGA GGCGTTTCGA GCGTCAGTGT GCTCGGTCCT GCAAGAAGTC
TGGGGCGTCG CAACACTGAG CGGTCTGGTC AATAACGCGG GTTACGGGCT GTTCAATCCG
TTGGAGACGG TCAGCGAAGC GCAGTTCGAT GGCCTGTTCA ATGTGCATCT CAAAGGCCCT
TTTTTCCTCA CCCAGACATT GCTGCCGTTG ATGGCGGAAA ACGCCAGCAT CGTCAATCTG
ACCAGTGCCA CCACTCGCGT CGCCACTGCG GGGGTCGCTC CCTATGCGGC GTTCAAGGGC
GGGCTTGAAG TCTTGACCCG CTATATGGCT GTCGAGTTTG GCGAGCGGCG CATAAGGGCC
AACGCCGTAT CACCCGGCGC CATTCGTACC GAACTGGGCG GTGGGCTCAA TGATGAGTTC
GAGGCGATGC TGGCAGCACA GACGGCCTTG GGCAGGGTCG GCGAGCCGCA AGATGTGGCA
CGCGTCATCG CCATGCTGCT GTCCGAAGAG GCTGGCTGGA TCAATGCGCA GACTATCGAA
GTCGCAGGCG GCTACAACAT CTGA
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| Protein sequence | MGVIVITGGS RGIGASAAEH VARRGMGVIL TYNANPEAAA TVVERIAQAG GKAVALRLDV
ADVGSFEAFR ASVCSVLQEV WGVATLSGLV NNAGYGLFNP LETVSEAQFD GLFNVHLKGP
FFLTQTLLPL MAENASIVNL TSATTRVATA GVAPYAAFKG GLEVLTRYMA VEFGERRIRA
NAVSPGAIRT ELGGGLNDEF EAMLAAQTAL GRVGEPQDVA RVIAMLLSEE AGWINAQTIE
VAGGYNI
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