Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3544 |
Symbol | |
ID | 3369071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4221692 |
End bp | 4222666 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653895 |
Product | putative integral membrane protein |
Protein accession | YP_236614 |
Protein GI | 66046773 |
COG category | [S] Function unknown |
COG ID | [COG3268] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0710897 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAC TTCTGATTTA TGGCGCTACG GGCTACACCG GGCGTATGGC CGCAGAGCGG GCCAGGGCGC TCGGCCTGAA GGTAGAAATC GCCGGACGCA ATCAGCAGCG CCTCGCCTCC CTCGCTGCGC AACTGGACGT GAAATACCGG GTTTTCGATG CCGACCAGGC CGAGGGTTTT TTGTCCGGCA TCTCGGTGTT GCTCAACTTC GCAGGGCCAT TTGTGCAGAC CGCCGAGCCG TTGATGCGCG CCTGTATCAA GGCCGGTGTC GACTACCTCG ACATCACCGC CGAGATCAAC GTTTACCGGC TGGCCGAAAG GCTGGGCGCT GAAGCGGCGG CAAGTCAGGT CATGCTGTTG CCGGGTGTCG GTTGGGATGT CGTGCCTACC GATTCGCTGG CCGTGCAGGT TGCCGGGCGC GTGCAGGGGC CAACGGCGCT GAACATGGCG CTGCAGGTGC CAGGGTCGAT GTCCCGCGGG TCTGCCATGA GTGTCAGCGA AATCATCGGT GCAGGCGTGC TCGCCAGAAT CGATGGCGAA CTTGTTGCAA CGCCGGATGC CGAGCCGCGT CATTTTGACT TTGGTCAGGG CCCGGTCCTT TGCGTACCGT TGTCATTCGG TGATCTGGTC ACCGCCTGGC ATTCGACCGG CATCCGCAAT ATTGCAATGT TCGTGCATAT CGCCGGGGAC GCGTTCCCGC AAGGCGATCT GTCACAACTG CCTGATGGCC CGACGCCCGA GCAAAGGGAG GCGCATCGGG CGCGTGCAGT GGTTGAGGTG ACCGATGCGA AGGGCGCGAT CGCACGTTCC ATGATCGAGA CCGTGAACGG CTATACCTAT ACGCCGCTGG CGGCCGTAGA GGCTGCGCGT CGCGTGCTCG ACGGCGAACG GCTGCCGGGT TTTGTCACAC CGGCCAAGGT CTTCGGTGGC GGTTTCGCCG AGAGCATTGC CGGTACGCTC GTGACTGACA TGTAA
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Protein sequence | MNTLLIYGAT GYTGRMAAER ARALGLKVEI AGRNQQRLAS LAAQLDVKYR VFDADQAEGF LSGISVLLNF AGPFVQTAEP LMRACIKAGV DYLDITAEIN VYRLAERLGA EAAASQVMLL PGVGWDVVPT DSLAVQVAGR VQGPTALNMA LQVPGSMSRG SAMSVSEIIG AGVLARIDGE LVATPDAEPR HFDFGQGPVL CVPLSFGDLV TAWHSTGIRN IAMFVHIAGD AFPQGDLSQL PDGPTPEQRE AHRARAVVEV TDAKGAIARS MIETVNGYTY TPLAAVEAAR RVLDGERLPG FVTPAKVFGG GFAESIAGTL VTDM
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