Gene Psyr_3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3544 
Symbol 
ID3369071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4221692 
End bp4222666 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content63% 
IMG OID637653895 
Productputative integral membrane protein 
Protein accessionYP_236614 
Protein GI66046773 
COG category[S] Function unknown 
COG ID[COG3268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0710897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC TTCTGATTTA TGGCGCTACG GGCTACACCG GGCGTATGGC CGCAGAGCGG 
GCCAGGGCGC TCGGCCTGAA GGTAGAAATC GCCGGACGCA ATCAGCAGCG CCTCGCCTCC
CTCGCTGCGC AACTGGACGT GAAATACCGG GTTTTCGATG CCGACCAGGC CGAGGGTTTT
TTGTCCGGCA TCTCGGTGTT GCTCAACTTC GCAGGGCCAT TTGTGCAGAC CGCCGAGCCG
TTGATGCGCG CCTGTATCAA GGCCGGTGTC GACTACCTCG ACATCACCGC CGAGATCAAC
GTTTACCGGC TGGCCGAAAG GCTGGGCGCT GAAGCGGCGG CAAGTCAGGT CATGCTGTTG
CCGGGTGTCG GTTGGGATGT CGTGCCTACC GATTCGCTGG CCGTGCAGGT TGCCGGGCGC
GTGCAGGGGC CAACGGCGCT GAACATGGCG CTGCAGGTGC CAGGGTCGAT GTCCCGCGGG
TCTGCCATGA GTGTCAGCGA AATCATCGGT GCAGGCGTGC TCGCCAGAAT CGATGGCGAA
CTTGTTGCAA CGCCGGATGC CGAGCCGCGT CATTTTGACT TTGGTCAGGG CCCGGTCCTT
TGCGTACCGT TGTCATTCGG TGATCTGGTC ACCGCCTGGC ATTCGACCGG CATCCGCAAT
ATTGCAATGT TCGTGCATAT CGCCGGGGAC GCGTTCCCGC AAGGCGATCT GTCACAACTG
CCTGATGGCC CGACGCCCGA GCAAAGGGAG GCGCATCGGG CGCGTGCAGT GGTTGAGGTG
ACCGATGCGA AGGGCGCGAT CGCACGTTCC ATGATCGAGA CCGTGAACGG CTATACCTAT
ACGCCGCTGG CGGCCGTAGA GGCTGCGCGT CGCGTGCTCG ACGGCGAACG GCTGCCGGGT
TTTGTCACAC CGGCCAAGGT CTTCGGTGGC GGTTTCGCCG AGAGCATTGC CGGTACGCTC
GTGACTGACA TGTAA
 
Protein sequence
MNTLLIYGAT GYTGRMAAER ARALGLKVEI AGRNQQRLAS LAAQLDVKYR VFDADQAEGF 
LSGISVLLNF AGPFVQTAEP LMRACIKAGV DYLDITAEIN VYRLAERLGA EAAASQVMLL
PGVGWDVVPT DSLAVQVAGR VQGPTALNMA LQVPGSMSRG SAMSVSEIIG AGVLARIDGE
LVATPDAEPR HFDFGQGPVL CVPLSFGDLV TAWHSTGIRN IAMFVHIAGD AFPQGDLSQL
PDGPTPEQRE AHRARAVVEV TDAKGAIARS MIETVNGYTY TPLAAVEAAR RVLDGERLPG
FVTPAKVFGG GFAESIAGTL VTDM