Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3530 |
Symbol | |
ID | 3369057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4206425 |
End bp | 4207144 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653881 |
Product | transcriptional regulator GntR |
Protein accession | YP_236600 |
Protein GI | 66046759 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.331945 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGAC CTGACAGTGC CCCGTTGTTT CTCACGCCTT CTGCCGCTGA AAAGGGCCGT GATGAACAGA TTTACCAGCA TGTCCTGGAA GCCATCGTCG AACACCGGCT CGCTCCGGGA ACGCGCTTGC CCGAGGACGC CCTGGCCGAC GTATTCGAGA TCAGCCGCAC CGGCATTCGC AAGGTCTTGC AGCGTCTGGC GCTGGAACGG CTGGTGACCC TGCGCCCCAA GCGCGGCGCG GAGGTCGCGC AACCGTCGGC TCAGGAAGCA CAGGATGTAT TGGGTGCCAG GCAACTGATC GAGCCCGCGC TGATGGCCGA GATCGCCACG CGAGTCGGCG GCCGGCGTCT GGATGCACTG CGTGCGCTTT GCGATCAGGA GCATGAGGCG CAACACGCGG GGCGCCACAG CGAAGCGATT CAACTGTCGG CGCGCTTTCA TGTGCAGTTG AGCGCGCTGG CGGGCAATCA GGTGTTGACC GAACAGGTCG CGCAGCTCAC CACGCGATCC TCGTTGATTG TTGCGGTGTA CGGTTCGCGA CGCAGTGTCG GGTGTGATTG TGGCCAGCAT GTCGACTTGC TGGCCTTGCT CGAAAGCGGG CAGGGCGAAC AGGCGCGCGA ATGGATGGCC GAGCATTTGC GCCGCATCCG CGCCAGCCTG AATGTGGATG CGCCGCTCAG CGAGACAGTG GATTTTCATA GCATTTTCAA ACGGCGCTGA
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Protein sequence | MIRPDSAPLF LTPSAAEKGR DEQIYQHVLE AIVEHRLAPG TRLPEDALAD VFEISRTGIR KVLQRLALER LVTLRPKRGA EVAQPSAQEA QDVLGARQLI EPALMAEIAT RVGGRRLDAL RALCDQEHEA QHAGRHSEAI QLSARFHVQL SALAGNQVLT EQVAQLTTRS SLIVAVYGSR RSVGCDCGQH VDLLALLESG QGEQAREWMA EHLRRIRASL NVDAPLSETV DFHSIFKRR
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