Gene Psyr_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3530 
Symbol 
ID3369057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4206425 
End bp4207144 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content63% 
IMG OID637653881 
Producttranscriptional regulator GntR 
Protein accessionYP_236600 
Protein GI66046759 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.331945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAC CTGACAGTGC CCCGTTGTTT CTCACGCCTT CTGCCGCTGA AAAGGGCCGT 
GATGAACAGA TTTACCAGCA TGTCCTGGAA GCCATCGTCG AACACCGGCT CGCTCCGGGA
ACGCGCTTGC CCGAGGACGC CCTGGCCGAC GTATTCGAGA TCAGCCGCAC CGGCATTCGC
AAGGTCTTGC AGCGTCTGGC GCTGGAACGG CTGGTGACCC TGCGCCCCAA GCGCGGCGCG
GAGGTCGCGC AACCGTCGGC TCAGGAAGCA CAGGATGTAT TGGGTGCCAG GCAACTGATC
GAGCCCGCGC TGATGGCCGA GATCGCCACG CGAGTCGGCG GCCGGCGTCT GGATGCACTG
CGTGCGCTTT GCGATCAGGA GCATGAGGCG CAACACGCGG GGCGCCACAG CGAAGCGATT
CAACTGTCGG CGCGCTTTCA TGTGCAGTTG AGCGCGCTGG CGGGCAATCA GGTGTTGACC
GAACAGGTCG CGCAGCTCAC CACGCGATCC TCGTTGATTG TTGCGGTGTA CGGTTCGCGA
CGCAGTGTCG GGTGTGATTG TGGCCAGCAT GTCGACTTGC TGGCCTTGCT CGAAAGCGGG
CAGGGCGAAC AGGCGCGCGA ATGGATGGCC GAGCATTTGC GCCGCATCCG CGCCAGCCTG
AATGTGGATG CGCCGCTCAG CGAGACAGTG GATTTTCATA GCATTTTCAA ACGGCGCTGA
 
Protein sequence
MIRPDSAPLF LTPSAAEKGR DEQIYQHVLE AIVEHRLAPG TRLPEDALAD VFEISRTGIR 
KVLQRLALER LVTLRPKRGA EVAQPSAQEA QDVLGARQLI EPALMAEIAT RVGGRRLDAL
RALCDQEHEA QHAGRHSEAI QLSARFHVQL SALAGNQVLT EQVAQLTTRS SLIVAVYGSR
RSVGCDCGQH VDLLALLESG QGEQAREWMA EHLRRIRASL NVDAPLSETV DFHSIFKRR