Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3529 |
Symbol | |
ID | 3369056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4205683 |
End bp | 4206414 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637653880 |
Product | Asp/Glu racemase |
Protein accession | YP_236599 |
Protein GI | 66046758 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4126] Hydantoin racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.323338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGTATTC AAGTGATCAA CCCCAATACC AGCGAAGCCA TGACCCACAA GATCGGTCTG GCCGCGCAAG CCGTGGCGCG CCCAGGCACA CAGATCATCG CCTGCAGTCC TGCGGATGGC CCGGTGTCCA TCGAAGGCCA TTTCGATGAG GCGATCGCGA CGCTGGGCGT GCTGGAGGAA GTGCGCAAGG GGCGCGAACA ACAGGTCGAC GCGCACATCA TCGCCTGTTT CGGCGACCCC GGCCTGCTGG CGGCACGCGA GTACGCCAGC GCCCCGGTGA TCGGCATCGC CGAAGCGGCC TTTCATATGG CCAGCCTGAT TTCTACCCGT TTCGCCGTGG TCACGACGCT GACCCGCACG CGGATCATCG CCGAGCACTT GCTGCAGCGT TATGGCTTCA GTGAGTTATG CACATCGGTG CGCTGTATCG ATCTGCCGGT GCTGGCGCTG GAGGAAAGCG GGCCGGAGCT CATCGAATGC ATGGCCGAAC AGGCCCGTCG CGCCCGTGAC GAAGAAGGGG CGGGAGCCAT TGTGCTGGGT TGCGGCGGGA TGGCGGATCT GGGCAGGCAA CTGAGCGAAG CGATTGGCCT GCCGGTCATC GACGGCGTGG CAGCGGCGGT GAAACTGGCC GAATCGCTGG TGGATCTGGG CCTGACCACC AGCAAACACG GCGACCTGGC CGACCCCATC AGCAAACCGT TCAAAGGCCG GTTTGCCTAC CTGAGTCGGT GA
|
Protein sequence | MRIQVINPNT SEAMTHKIGL AAQAVARPGT QIIACSPADG PVSIEGHFDE AIATLGVLEE VRKGREQQVD AHIIACFGDP GLLAAREYAS APVIGIAEAA FHMASLISTR FAVVTTLTRT RIIAEHLLQR YGFSELCTSV RCIDLPVLAL EESGPELIEC MAEQARRARD EEGAGAIVLG CGGMADLGRQ LSEAIGLPVI DGVAAAVKLA ESLVDLGLTT SKHGDLADPI SKPFKGRFAY LSR
|
| |