Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3516 |
Symbol | |
ID | 3369043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4192314 |
End bp | 4193705 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653867 |
Product | hypothetical protein |
Protein accession | YP_236586 |
Protein GI | 66046745 |
COG category | [S] Function unknown |
COG ID | [COG5383] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0301884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACAG CACGCTTTGC CGACCCGGAC CAGATCCGCG CGGGCTTTTC TCGCGCCATG TCGCAGATGT ACAAGCACGA AGTGCCGCTG TACGGCACGC TGATGGCGCT GGTGAGTGAA GTCAACGAAC AGGTCATGAG CCATGACAGC AGTGTGCTGG ACAGCCTGCG CCAGACCGGT GAAATCCAGC GCCTGGACAT GGAACGGCAC GGTGCGATCC GCGTCGGCAC GGCACAGGAA CTGGCCACCC TCGCCCGCCT GTTCGCGGTC ATGGGCATGC AGCCGGTGGG TTACTACGAC CTGAGCGCGG CCGGCGTGCC GGTTCACTCC ACCGCCTTTC GCGCCGTGCA TGAGCAGGCG CTGCAGGTCA GTCCGTTTCG GGTGTTCACC TCGTTGCTGC GTCTGGAACT GATCGAAAGC GACAGCCTGC GTGAGTTCGC CAGTCAGGTG CTGGGCAAAC GCAGTATCTT CACGCCCGGC GCCCTGGCGT TGATCGAGAA GCATGAAGCA GACGGCGGCT TGAGCGAAGC CGATGCGGCC GAGTTCATTC AGCAGGCGCT GGAAACCTTT CGCTGGCACA ACACGGCGAC CGTTTCGCTG GACGACTATC AGAAGCTGAA CACGCAGCAT CGTCTGATCG CTGATGTGGT GGCGTTTCGT GGTCCGCACA TCAACCACCT GACGCCTCGC ACGCTGGACA TCGATGCGGT TCAGGCCGGC ATGCCCGGCA AGGGCATCAC CCCCAAAGCG GTGGTTGAAG GGCCGCCACG TCGCCAGTGC CCGATTCTGC TGCGCCAGAC CAGCTTCAAG GCGCTGGAAG AACCGATTGC CTTCATCGGC CAAGGTGGCA GTCAGTCGGG CAGCCACTCG GCACGCTTCG GCGAGATCGA ACAGCGTGGC GCCGCACTGA CGCCCAAAGG CCGCGAGCTG TATGACCGGC TGTTGAGCGA AGCCCGCGAC GCGCTGGGCG AGTTCCCCAA TGAGGCCAAT GCCGTGCGCT ATGCCGGGCT GCTGGAAGAG ACGTTCAAGG CGTTCCCGGA CAGCCACGCT GAAATGCGCA GGCAGGGTCT GGCCTACTTC CGCTATTTCC CGACCGAATC AGGCATTGCC GCGCGCGCAT CAGGCAGTCT GGAGCAGCTT GTCGAAGCCG GTCATGTGCG CTTCGAGCCA CTGGTGTACG AAGACTTTTT GCCGGTCAGC GCGGCGGGTA TCTTCCAGTC CAATCTGGGC GATAACGCAC AGGCGCATTA CGCGACGAAT TCGAATCAGC AGGATTTCGA GCGGGCGCTG GGACGCGGGA CGCTTAACGA ACTGGACCTG TATGCCGATA CCCAGCGTCG CTCCCTGGAG GAATGCGCCA AGGCGCTGGA GCTGAGCAGT CCCGCCTACT AA
|
Protein sequence | MSTARFADPD QIRAGFSRAM SQMYKHEVPL YGTLMALVSE VNEQVMSHDS SVLDSLRQTG EIQRLDMERH GAIRVGTAQE LATLARLFAV MGMQPVGYYD LSAAGVPVHS TAFRAVHEQA LQVSPFRVFT SLLRLELIES DSLREFASQV LGKRSIFTPG ALALIEKHEA DGGLSEADAA EFIQQALETF RWHNTATVSL DDYQKLNTQH RLIADVVAFR GPHINHLTPR TLDIDAVQAG MPGKGITPKA VVEGPPRRQC PILLRQTSFK ALEEPIAFIG QGGSQSGSHS ARFGEIEQRG AALTPKGREL YDRLLSEARD ALGEFPNEAN AVRYAGLLEE TFKAFPDSHA EMRRQGLAYF RYFPTESGIA ARASGSLEQL VEAGHVRFEP LVYEDFLPVS AAGIFQSNLG DNAQAHYATN SNQQDFERAL GRGTLNELDL YADTQRRSLE ECAKALELSS PAY
|
| |