Gene Psyr_3516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3516 
Symbol 
ID3369043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4192314 
End bp4193705 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content63% 
IMG OID637653867 
Producthypothetical protein 
Protein accessionYP_236586 
Protein GI66046745 
COG category[S] Function unknown 
COG ID[COG5383] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0301884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAG CACGCTTTGC CGACCCGGAC CAGATCCGCG CGGGCTTTTC TCGCGCCATG 
TCGCAGATGT ACAAGCACGA AGTGCCGCTG TACGGCACGC TGATGGCGCT GGTGAGTGAA
GTCAACGAAC AGGTCATGAG CCATGACAGC AGTGTGCTGG ACAGCCTGCG CCAGACCGGT
GAAATCCAGC GCCTGGACAT GGAACGGCAC GGTGCGATCC GCGTCGGCAC GGCACAGGAA
CTGGCCACCC TCGCCCGCCT GTTCGCGGTC ATGGGCATGC AGCCGGTGGG TTACTACGAC
CTGAGCGCGG CCGGCGTGCC GGTTCACTCC ACCGCCTTTC GCGCCGTGCA TGAGCAGGCG
CTGCAGGTCA GTCCGTTTCG GGTGTTCACC TCGTTGCTGC GTCTGGAACT GATCGAAAGC
GACAGCCTGC GTGAGTTCGC CAGTCAGGTG CTGGGCAAAC GCAGTATCTT CACGCCCGGC
GCCCTGGCGT TGATCGAGAA GCATGAAGCA GACGGCGGCT TGAGCGAAGC CGATGCGGCC
GAGTTCATTC AGCAGGCGCT GGAAACCTTT CGCTGGCACA ACACGGCGAC CGTTTCGCTG
GACGACTATC AGAAGCTGAA CACGCAGCAT CGTCTGATCG CTGATGTGGT GGCGTTTCGT
GGTCCGCACA TCAACCACCT GACGCCTCGC ACGCTGGACA TCGATGCGGT TCAGGCCGGC
ATGCCCGGCA AGGGCATCAC CCCCAAAGCG GTGGTTGAAG GGCCGCCACG TCGCCAGTGC
CCGATTCTGC TGCGCCAGAC CAGCTTCAAG GCGCTGGAAG AACCGATTGC CTTCATCGGC
CAAGGTGGCA GTCAGTCGGG CAGCCACTCG GCACGCTTCG GCGAGATCGA ACAGCGTGGC
GCCGCACTGA CGCCCAAAGG CCGCGAGCTG TATGACCGGC TGTTGAGCGA AGCCCGCGAC
GCGCTGGGCG AGTTCCCCAA TGAGGCCAAT GCCGTGCGCT ATGCCGGGCT GCTGGAAGAG
ACGTTCAAGG CGTTCCCGGA CAGCCACGCT GAAATGCGCA GGCAGGGTCT GGCCTACTTC
CGCTATTTCC CGACCGAATC AGGCATTGCC GCGCGCGCAT CAGGCAGTCT GGAGCAGCTT
GTCGAAGCCG GTCATGTGCG CTTCGAGCCA CTGGTGTACG AAGACTTTTT GCCGGTCAGC
GCGGCGGGTA TCTTCCAGTC CAATCTGGGC GATAACGCAC AGGCGCATTA CGCGACGAAT
TCGAATCAGC AGGATTTCGA GCGGGCGCTG GGACGCGGGA CGCTTAACGA ACTGGACCTG
TATGCCGATA CCCAGCGTCG CTCCCTGGAG GAATGCGCCA AGGCGCTGGA GCTGAGCAGT
CCCGCCTACT AA
 
Protein sequence
MSTARFADPD QIRAGFSRAM SQMYKHEVPL YGTLMALVSE VNEQVMSHDS SVLDSLRQTG 
EIQRLDMERH GAIRVGTAQE LATLARLFAV MGMQPVGYYD LSAAGVPVHS TAFRAVHEQA
LQVSPFRVFT SLLRLELIES DSLREFASQV LGKRSIFTPG ALALIEKHEA DGGLSEADAA
EFIQQALETF RWHNTATVSL DDYQKLNTQH RLIADVVAFR GPHINHLTPR TLDIDAVQAG
MPGKGITPKA VVEGPPRRQC PILLRQTSFK ALEEPIAFIG QGGSQSGSHS ARFGEIEQRG
AALTPKGREL YDRLLSEARD ALGEFPNEAN AVRYAGLLEE TFKAFPDSHA EMRRQGLAYF
RYFPTESGIA ARASGSLEQL VEAGHVRFEP LVYEDFLPVS AAGIFQSNLG DNAQAHYATN
SNQQDFERAL GRGTLNELDL YADTQRRSLE ECAKALELSS PAY