Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3506 |
Symbol | |
ID | 3369033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4180950 |
End bp | 4182983 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653857 |
Product | sulfatase |
Protein accession | YP_236576 |
Protein GI | 66046735 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.633638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTGGT TGCAATCGCG ACGCCTGCAT TATTGGCTGG GCGCGGTCAT GGTGGTGTTC CTGCTGTCGG CGTTGCTGAG GGGCGTGTTC TTCTACGGGT TTTCCGGCAT CGAACCGGGC ACGCTGTTCA CGCATGGCGA GGTCGCCCAG ACGCTGGGCA TCGGTTTGCG TTTCGACTTG CGCCTGGCGC TGCTGATACT GCTGCCAGTC GCGGTGCTGC TCTGGTTGCC GGGCTGGAAC CTGATCAGCG TGCGTGCCTT GCGCTGGCTG GCGCGAGGTT ATCTGATCGT GACGCTGGCG ATTCTGACGA TGATCTACAT CGTCGATTTC GGTCATTACG CCTATCTCGG CGTCAGGCTC AACGCCAGTG TGCTGCGCTA TCTGGAGGAT GCGCAGATTT CCCGGGACAT GCTCTGGCAG ACCTATCCAG TGGTGTGGAT CACTGTCGGT TGGCTGCTCA CGGTCGCAGT GCTCGGCTGG GTATTGATCA GGCTTGAGCG TGTCACCCTG GACCGTGAGG CCAGACCGAT CAAACGCTGG TCCGCGGTCT GGGGTTCGGC ACTGATGATC TGTGCAACCT TCCTCGGCCT GTTGGGCCGG GTGGAGAATC TCAATCTGGA AAACCCGGTA CCGCTGCGCT GGAGCGATGC GTTCTTCTCC GGTAACAGCC AGGTGGCGGC GCTGGGGCTC AATCCGGCGC TGTTTCTGTA CGACACGCTC AAGGTCTCGC AGTCGAACTT CGATGAGCCT CAGGTGCGCA AGCATTATGA AAAAGTCGCG CGTTATCTGG GCGTCCGCCA GCCAGACGTG CAGGGGTTGA GTTTCAAACG TCATCAGCCC GTGCAGCCTT ACCGGCTGCC GGGCGAGCGG CCGCCGAATG TCATGTTCGT CATGCTCGAA TCGCTGGGCA CCAGCGCTGT CGGCGCCTAC GGCAACCCGC TGAACCCGAC GCCGAACCTG GACCATCTGG CCACCCAAAG CTGGTTCTTC AAGCACTTTT ACGTGCCGGT TACCGGCACT GCGAAAACGG TCTGGGCGAG CATCACCGGG GTACCCGACG TGACCCGGCA GGAAACGGCT ACACGTCATC CGCTGCTCAC CCGGCAAAAC ACCATCATCA ACGACTTCAA AGGGTACGAG AAGCTGTACA TGATTGGCGG CAATTCCGGC TGGGCCAACA TGAACGCCCT GATCCGTCGC AGTATCGACG ACGTACGGCT GTATGACGAG CGCGACTGGA AGTCACCGCA GGTGGATGTG TGGGGGATTT CCGACCTGGA CCTGTTCAAG GAGAGTGACC GGATCCTGCG TGCGTTGCCA GCCGACAAAC CGTTCTTTGC CTACGTGCAG ACTGCGGGCA ATCACCGGCC GTTTACCATT CCCAAAGACA ACGACGGTTT TCAGGTCAGC GACAAGACCG TGGAGCAGGT CCAGGCCGCC GGTTCGCGCA GCGTGGAGCA GTACAACGCG GTGCGCCTGC TGGATTTCAA TATCGGGCGG TTGATGGAGC TGGCCAAGGC GGGCGGTTAC TACGAAAACA CCATCTTCGT GCTGTTTGGC GATCACAACA CGCGCATCAG CCAGATCCCG CACATGGCAC CAGCGTTCGA GCAATTGGGC CTGGAGAGCA ACAACGTTCC GCTGTTGATT CACGCCCCTG GCCTGCTGGG CACACGGGTC GTCGACGAAG CGGTCGGCCT TGCCGACCTG CTGCCGACAC TCGCCGGGAT GGCCGGTATG GACTTCACCA GCGGCACCAT GGGCCGCGAC ATTCAGCAGG CGGCTCCGGA AGGTGAACGC GTAGTGCCGC TGGTACTGCG CGAAGGTACG TTCCCGCTGA TCGGCGGTGT CACGCGCAAC TACCTGCTGC AAATGGAACA CGACGGCAGT TCGCCAACGC TCCACGACCT GTCTTCGCCC ACGCCGCTGG ATAACGTTGC CGAACAGAAT CCGCAAGAGT TCGAGCGGCT GCGCGACCTG ACCCGCGGTC TGCATGAAAC CTCGCGAATG ATGCTGTATC AGAACGTGCG TTGA
|
Protein sequence | MSWLQSRRLH YWLGAVMVVF LLSALLRGVF FYGFSGIEPG TLFTHGEVAQ TLGIGLRFDL RLALLILLPV AVLLWLPGWN LISVRALRWL ARGYLIVTLA ILTMIYIVDF GHYAYLGVRL NASVLRYLED AQISRDMLWQ TYPVVWITVG WLLTVAVLGW VLIRLERVTL DREARPIKRW SAVWGSALMI CATFLGLLGR VENLNLENPV PLRWSDAFFS GNSQVAALGL NPALFLYDTL KVSQSNFDEP QVRKHYEKVA RYLGVRQPDV QGLSFKRHQP VQPYRLPGER PPNVMFVMLE SLGTSAVGAY GNPLNPTPNL DHLATQSWFF KHFYVPVTGT AKTVWASITG VPDVTRQETA TRHPLLTRQN TIINDFKGYE KLYMIGGNSG WANMNALIRR SIDDVRLYDE RDWKSPQVDV WGISDLDLFK ESDRILRALP ADKPFFAYVQ TAGNHRPFTI PKDNDGFQVS DKTVEQVQAA GSRSVEQYNA VRLLDFNIGR LMELAKAGGY YENTIFVLFG DHNTRISQIP HMAPAFEQLG LESNNVPLLI HAPGLLGTRV VDEAVGLADL LPTLAGMAGM DFTSGTMGRD IQQAAPEGER VVPLVLREGT FPLIGGVTRN YLLQMEHDGS SPTLHDLSSP TPLDNVAEQN PQEFERLRDL TRGLHETSRM MLYQNVR
|
| |