| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3501 |
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| Symbol | |
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| ID | 3369028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4171982 |
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| End bp | 4173307 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637653852 |
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| Product | major facilitator transporter |
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| Protein accession | YP_236571 |
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| Protein GI | 66046730 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.141937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCTG TTTCGACCCA CGAGGTGGGC GACGCCGAAG GCAATCATGT CTACCGTCGC
ATCACCCTGC GCCTTATCCC GTTTATCTTC ATTTGTTACC TGTTCAATTA CCTCGACCGC
GTGAACGTCG GCTTTGCCAA GCTGCAGATG CTCGATGCCC TGAGTTTCAG CGAGACGGTC
TATGGCCTGG GCGCCGGTAT CTTCTTCATT GGCTACGTGC TGTGTGGCCT GCCCAGCAAT
CTGGCGCTGA ACCGCTTCGG GCCGCGTCGC TGGATCGGTC TGATGATGAT TACCTGGGGA
ATCTTCTCGA CCTGCCTGAT GTTCGTCACC ACGCCGGTCG AGTTCTACGT GCTGCGCTTT
CTGACCGGTA TGGCAGAGGC CGGTTTCTTC CCAGGCATCG TGCTGTACCT CTCGCGCTGG
TATCCAAATC AGCGTCGCGG GCGGATCATG GCACTGTTCA TGTCGGCCAT CCCGGTCTCC
GGCCTGCTGG GCGGCCCGTT TTCCGGACGG ATTCTCAATC ATTTCGCTGC GGGCCAGGGC
GGCATGGCCG GCTGGCAATG GATGTTCCTG ATTCAGGGCG TGCCGACCGT GGCGCTGGGT
GTGCTGGCCT TCGTTCTGCT GTGCGACAAG GTCGAGGATG CCCGCTGGCT GACGCCCGGA
CAGCGTCAGC GGGTCAAGAC CGATATCACC AACGATGAAC TGAGCCGTCC GGTGCACGGC
AAAAGCTCGG TGGCTTCCGT GCTGAGCATG CCGTTCATAT GGATCCTGGG CTTTATCTAC
TTCTGCATTC AAAGCGGCGT CTACGCGATC AATTTCTGGC TGCCGTCGAT CATCAAGAAC
CTCGGTTTCA GCGATGCACT CGTGATCGGC TGGATCAGCG CCGTGCCGTA CCTGATGGCA
GGCGTGTTCA TGCTGCTGGT CGGCCGCTCC GCCGACCTGC GCAATGAGCG CCGCTGGCAT
CTGGTGGTAC CGATGCTGAT GGGCGCGACC GGCCTGATCA TCGCCGCCAA TTTCGCGACG
CTGCCCATCG TTGCCATCAT CGGGCTGACT ATCGCGACCA TGGGTGCGCT GACCAGCCTG
CCGATGTTCT GGCCATTACC GACCGCCCTG CTGAGTGCCA GCGTCGCCGC AGGCGGGCTG
GCGCTGATCA ACTCGATTGG GCAGATGGCA GGCTTTCTCA GCCCTTACCT GGTGGGCTGG
ATCAAGGATC AGACCGGCTC GACTACCCTG GCGCTGTATT CACTGGCCGC GCTGACCATC
GTCGGCAGTC TGGTGGCATT GCGGGTAAGT CGGTCGTCGG CAGTCAAGGT GGCAGGGCCC
GCCTGA
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| Protein sequence | MTPVSTHEVG DAEGNHVYRR ITLRLIPFIF ICYLFNYLDR VNVGFAKLQM LDALSFSETV
YGLGAGIFFI GYVLCGLPSN LALNRFGPRR WIGLMMITWG IFSTCLMFVT TPVEFYVLRF
LTGMAEAGFF PGIVLYLSRW YPNQRRGRIM ALFMSAIPVS GLLGGPFSGR ILNHFAAGQG
GMAGWQWMFL IQGVPTVALG VLAFVLLCDK VEDARWLTPG QRQRVKTDIT NDELSRPVHG
KSSVASVLSM PFIWILGFIY FCIQSGVYAI NFWLPSIIKN LGFSDALVIG WISAVPYLMA
GVFMLLVGRS ADLRNERRWH LVVPMLMGAT GLIIAANFAT LPIVAIIGLT IATMGALTSL
PMFWPLPTAL LSASVAAGGL ALINSIGQMA GFLSPYLVGW IKDQTGSTTL ALYSLAALTI
VGSLVALRVS RSSAVKVAGP A
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