| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3497 |
|---|
| Symbol | |
|---|
| ID | 3369024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4167018 |
|---|
| End bp | 4167848 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637653848 |
|---|
| Product | SH3-like region |
|---|
| Protein accession | YP_236567 |
|---|
| Protein GI | 66046726 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3103] SH3 domain protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGGA TCATCAGGTG CTTTTTCAAC GCGCCTGATA GGCAGACATT CCGTCCGGGC
AGGAGTTGCA AAACCGTTGA TCACTTGCCG CTCCCATCCT TAGCCGGCCC GTTAAACGAG
GCTTTATTTT CATTTCAGAT AAAGATAATT ATCGCCATGT CTCGTCATTT TTCCGCACTT
CTTTCCCGAG CCCCTGGCCT GTTCGCCGTT TCGCGTCGCT TGCTCGGCGC AGGCTTGGTT
GGCGCTGCAT TGACCGTTGT CATGCCTGGC AGCGCACAGG CCGCCGGCAG CGATCGCTGG
GTCAGCGACA GCCTCACTAC CTACGTACGC AGCGGACCAA CCGATGATCA TCGGATTGTG
GGGACGCTGA AATCCGGGCA GAAGGTCGAG CTGCTCAGCG CTTCGGGCAA GTTCAGCCAG
GTGCGTGGCG AAGGCGGTTC CACCGTGTGG ATCCCCAGCA GCGACTTGCA GGAAGTTCCT
GGCCAGGCCG AGCGTGTGCC GCAGCTGACT CAGCAGGTTG CCGACCTGAC CGAGCAGCTG
GCGGGCATCG ACAACACCTG GAAGACCCGC GTGCAAGGCA TGCAGGAAAC GCTGGACGCG
CGCAAGAAGC TGGTCGACGA ACTGGAGGCG CGCACCAAGA CCCTCAACGA TCAACTGGCC
GACTCTCAGG CTGAGTTGCG TGCGACTCAG GCGCGACTTG GCGACGAGAA CAAGCAGGTG
ATGATGCGTT ACATGGTCTA CGGCGGCAGC ATTGCCGGTG CTGGCTTGCT GGTCGGCCTG
ATCCTTCCGG CGCTGACCAA GGGCCGCAAG AAGAACGACG GCTGGGTGTA A
|
|---|
| Protein sequence | MKGIIRCFFN APDRQTFRPG RSCKTVDHLP LPSLAGPLNE ALFSFQIKII IAMSRHFSAL
LSRAPGLFAV SRRLLGAGLV GAALTVVMPG SAQAAGSDRW VSDSLTTYVR SGPTDDHRIV
GTLKSGQKVE LLSASGKFSQ VRGEGGSTVW IPSSDLQEVP GQAERVPQLT QQVADLTEQL
AGIDNTWKTR VQGMQETLDA RKKLVDELEA RTKTLNDQLA DSQAELRATQ ARLGDENKQV
MMRYMVYGGS IAGAGLLVGL ILPALTKGRK KNDGWV
|
|---|
| |