Gene Psyr_3492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3492 
Symbol 
ID3369019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4160858 
End bp4162201 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content60% 
IMG OID637653843 
Productglutamate--ammonia ligase 
Protein accessionYP_236562 
Protein GI66046721 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.38104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGCA ATGACCCCCA TTCGCAGAAA GAAATGCTGA TGGGCATTGA TGAAGTGGAG 
TGTGTAACCC CGGATTTGAA CGGTGTACCG CGCGGCAAGG TAATGACGGC TGAAGGTTTT
CTCGAAGGTC GCCGTTTGCA ACTGGCGCGC GGCGTGTTGC TGCAATGCAT CATGGGCGGG
TATCCGCCGG CGCGCTTTTA CGGCAGTGAC GACGGCGATC TGGCACTGAT CAGTGATCCG
CAGCAGCTCC ACCGTCTGCC CTGGAGCACG TCGCCGCGAG CCTTGGCCAT CTGCGATGCG
CAGGACCTCG ATGGCCAGCC CTGCATGCTC TCTACCCGTA ATCAGCTCAA GGCTGTTATC
GCCCGTTACG TTGCGCAGGG GCTGGTGCCA GTGGTGGCCA CCGAACTCGA GTTTTTTGTC
TTCGCGCCCA ATCCCGAGCC GCTTTATCCA TTCGAGCCGC CGACCGGGCT GGACGGGCGA
CGCGAACAGG GGCACTCGGC ATTCAGCGTC AGCTCCAACA ACGGCTTGCG GACTTTTTTT
GCCGAGGTGT ATGCCTGCAT GGCAGCGCTG GGGCTGCCGC GTGACACGGT GATGCACGAG
ATGGGTGTCA GCCAGTTCGA GATCAACCTG CTGCATGGCG ATCCGCTGCT GCTGGCCGAT
CAGACTTTTC TGTTCAAGCA CCTGCTCAAG GAGGTTGCGC TCAAACACGG GCTCATCGTG
GTGTGCATGG CCAAACCGCT CGCCCATACG GCGGGCAGTT CGATGCATAT CCATCAGAGC
GTGGTGGCAG CAGAGGGCGC AGTGAATGTA TTCAGTGATG CGCAGGGTGA GCCGAGCGAC
ACGTTTGGTC ATTTCATTGC CGGCCAGCAA GCCTGCATGG CGGACTTCAC CGCGCTGTTC
GCGCCCAATG TGAATTCCTA CCAGCGCCTG TGCCATCCTT ATGCATCGCC CAACAACGCT
TGCTGGTCCT ACGACAATCG CGCTGCCGGA TTACGTATTC CGTCGAGTGC AGCGGCGGCC
AGAAGGGTGG AGAATCGTCT GCCGGGCGCT GACGCCAATC CCTATCTGGC CATCGCTGCA
AGTCTGGCGG CCGGGTTGCA CGGCATCGAG CAGCGACTGG AACCGACGCC GCCGCTGCAG
GGCGAACTGG AGGTGCCGGA AGAATTGTTA CTGCCGTGTA CCTTGCACGC TGCTCTGGAG
CGTCTGAAAA GCAGTCAGTT GGCCAAGGAA CTGTTTGGTC ATGAATTCAT CGAAGGCTAC
ATTGCGTCGA AGGCCCTGGA ACTGACCAGT TTTTTCGACG AGATAACCCC CTGGGAACGG
CGCGTGCTGG CTGCTCAGGT TTAA
 
Protein sequence
MTGNDPHSQK EMLMGIDEVE CVTPDLNGVP RGKVMTAEGF LEGRRLQLAR GVLLQCIMGG 
YPPARFYGSD DGDLALISDP QQLHRLPWST SPRALAICDA QDLDGQPCML STRNQLKAVI
ARYVAQGLVP VVATELEFFV FAPNPEPLYP FEPPTGLDGR REQGHSAFSV SSNNGLRTFF
AEVYACMAAL GLPRDTVMHE MGVSQFEINL LHGDPLLLAD QTFLFKHLLK EVALKHGLIV
VCMAKPLAHT AGSSMHIHQS VVAAEGAVNV FSDAQGEPSD TFGHFIAGQQ ACMADFTALF
APNVNSYQRL CHPYASPNNA CWSYDNRAAG LRIPSSAAAA RRVENRLPGA DANPYLAIAA
SLAAGLHGIE QRLEPTPPLQ GELEVPEELL LPCTLHAALE RLKSSQLAKE LFGHEFIEGY
IASKALELTS FFDEITPWER RVLAAQV