Gene Psyr_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3488 
Symbol 
ID3369015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4157659 
End bp4157973 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content54% 
IMG OID637653839 
Productanti-sigma-28 factor, FlgM 
Protein accessionYP_236558 
Protein GI66046717 
COG category[K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.840831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATAG ATTTCAGTCG CCTTAACAAC TCACAGTCTG TTGCCGGTGC TTCACGTACC 
AGCGCCAGTA AAGACACCGC CAAAACCGAT GCTCCAGCCC CTGCCGTCAC CGCAGGTGTC
AAAAGCACCG GGGAAACTTT TTCCTTGAGC AGTGAGGCTC AACAGTTGCA GAAAATCACG
GACAAGCTGA CCGATCTGCC AACCGTCAAC AGTGCTCGGG TTGCCGAGCT CAAACAGGCC
ATCGCCGACG GTAGTTACAC AGTGGACAGC AACCGTGTCG CCAGCAAACT GTTGAATTTC
GAAACCCAAC GCTAA
 
Protein sequence
MVIDFSRLNN SQSVAGASRT SASKDTAKTD APAPAVTAGV KSTGETFSLS SEAQQLQKIT 
DKLTDLPTVN SARVAELKQA IADGSYTVDS NRVASKLLNF ETQR