Gene Psyr_3480 details

Gene Information

• Locus tag: Psyr_3480
• Symbol: flgC
• ID: 3369007
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. syringae B728a
• Kingdom: Bacteria
• Replicon accession: NC_007005
• Strand: -
• Start bp: 4151693
• End bp: 4152133
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637653831
• Product: flagellar basal body rod protein FlgC
• Protein accession: YP_236550
• Protein GI: 66046709
• COG category: [N] Cell motility
• COG ID: [COG1558] Flagellar basal body rod protein
• TIGRFAM ID: [TIGR01395] flagellar basal-body rod protein FlgC

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.485481
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCACTAG CCAATGTGTT CAACATTGCC GGTAGCGCCA TGAGTGCCCA GACCACGCGT 
CTGAACACCA CGGCCAGTAA CATCGCCAAC GCCGAGACCG TGTCTTCGAG CATGGACCAG 
ACCTATCGCG CCCGTCACCC GGTGTTCGCC ACCGTGATGC AGGGTCAGCA GTCCACAGGT 
GGTTCGCTGT TCCAGGACCA GGGCGAAGCC GGGCAGGGTG TTCAGGTCAA CGGCATCATC 
GAAGACAGCT CGAACCTGGA AGCACGTTAC GAGCCCAATC ATCCTTCCGC TGACAAGGAC 
GGGTATGTCT ACTACCCCAA CGTCAATGTC GTGGAAGAAA TGGCCGACAT GATTTCTGCC 
AGCCGGTCTT TCCAGACCAA CGCAGAAATC ATGAACACCG CTAAATCCAT GATGCAGAAG 
GTTCTGACCC TCGGTCAGTG A 

 

Protein sequence

MSLANVFNIA GSAMSAQTTR LNTTASNIAN AETVSSSMDQ TYRARHPVFA TVMQGQQSTG 
GSLFQDQGEA GQGVQVNGII EDSSNLEARY EPNHPSADKD GYVYYPNVNV VEEMADMISA 
SRSFQTNAEI MNTAKSMMQK VLTLGQ