| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3478 |
|---|
| Symbol | flgE |
|---|
| ID | 3369005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4149634 |
|---|
| End bp | 4150962 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637653829 |
|---|
| Product | flagellar hook protein FlgE |
|---|
| Protein accession | YP_236548 |
|---|
| Protein GI | 66046707 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1749] Flagellar hook protein FlgE |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTCA ATATCGGCCT TAGTGGGCTC TATGCTGCAA ACAAAAGTCT CGACGTTACC
GGCAACAACA TTGCCAACGT CGCGACAACC GGTTTCAAAT CGTCACGTGC CGAGTTCGCT
GATCAGTATG CTCAGTCGAT TCGCGGTACT TCCGGCAATA CCAGTGTCGG CAGTGGCGTG
AGAACTGCGG CAGTTTCCCA GCAGTTCTCC CAGGGCAGCC TGACCACCGG AACAGCCAAC
AGTCTGGACC TGGCCATCAA TGGCGACGGG TTCTTCATGA TGAGCAATAA CGGCGAGAAG
CTGTACACCC GTGCCGGTGC ATTCCACACC GACAAGGAAG GCTACGTCGT CAATAGCAGC
AACATGAAGC TGCAGGGTTA CAACGTTGAC GCCAATGGCG CTGTGGTGAC CGGCGCGCTC
AGCGATCTGC GTGTGAATGC GTCCAACCTG GAGCCCAAGG CGACGACCAC GATCACCAAC
TCCGCCAACC TGAACTCGAC AACTGCGCTG CCGACCGTTG CGACGTTCGA TGCGACCGAT
ACCAATAGCT ACAACGTCAA GTACAGCACC CCGACTTACG ACACTCAGGG TAATGCGCAC
ACCCTGGATC AGTATTTCGT CAAGACCGGC ACCAATACCT GGTCGATGTA TTCCCTGATG
GACGGGCGCA GCATTTCCGA TCCGACGTCC ACCACGCCGG ACAAGAATAA CCTGACATTC
GATTCCTCGG GCAAACTGGT GACCACCGCC GGCGGCGCCG TTCCTACTGA CAGCGCCAAC
ATCAAGTTCA ACGCTGACGG TACATTCGCC GTGACCAACT GGGTTCCTGG CGTGCAGGTC
GGTACTGGTA CGGCAGCTAC CTGGGCAGCC AATGGCGCGA CGGGCGCTGC TTCGATCAAG
CTGGACATGT CGAGCACTAC CCAGACCGCT TCGGTATCCG GTCTGCTCAA GCAGGATCAG
AATGGCTACG CCACTGGCCA GCTGAGCGGC ATGAACGTTG ACTCGAGCGG CAACCTGTTC
GCCACTTACA CCAACGGCAA GTCGCAGGTG ATCGGTCAGA CTTCGCTGAC CAGCTTTGCC
AACGTGCAGG GTCTGGCGCA GGCCGGCGGC ACCAACTGGC GTGAAACGTT CGCTTCCGGC
GTCCCGGTGA GCGGCGCTCC ACAGTCGGGT ACGCTGGGTT ACATCACCGG TCAGGCGCTG
GAAGAATCCA ACGTCGACCT GACCATGGAA CTGGTTAACC TGATCAAGGC GCAGAGCAAC
TATCAGGCTA ACGCCAAGAC CATTTCCACA CAAAGCACCA TCATGCAGAC CACTATTCAG
ATGACGTAA
|
|---|
| Protein sequence | MSFNIGLSGL YAANKSLDVT GNNIANVATT GFKSSRAEFA DQYAQSIRGT SGNTSVGSGV
RTAAVSQQFS QGSLTTGTAN SLDLAINGDG FFMMSNNGEK LYTRAGAFHT DKEGYVVNSS
NMKLQGYNVD ANGAVVTGAL SDLRVNASNL EPKATTTITN SANLNSTTAL PTVATFDATD
TNSYNVKYST PTYDTQGNAH TLDQYFVKTG TNTWSMYSLM DGRSISDPTS TTPDKNNLTF
DSSGKLVTTA GGAVPTDSAN IKFNADGTFA VTNWVPGVQV GTGTAATWAA NGATGAASIK
LDMSSTTQTA SVSGLLKQDQ NGYATGQLSG MNVDSSGNLF ATYTNGKSQV IGQTSLTSFA
NVQGLAQAGG TNWRETFASG VPVSGAPQSG TLGYITGQAL EESNVDLTME LVNLIKAQSN
YQANAKTIST QSTIMQTTIQ MT
|
|---|
| |