Gene Psyr_3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3464 
Symbol 
ID3368991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4127689 
End bp4129140 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content56% 
IMG OID637653815 
Productflagellar hook-associated protein 2, N-terminal:flagellar hook-associated 2, C-terminal:flagellin hook IN 
Protein accessionYP_236534 
Protein GI66046693 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.538459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGTC CGATTACATC TACAAATGGT ATTGGGTCCG GTTTGGCAAT CGGTTCCATC 
GTCGAAGGTC TTGTCGGTGC TGAAAAAGCG CCCAAGCAGA ACCAGATCGA CAAGCAGAGC
GCCTCCACGA CTGCATCCCT GTCGGGTGTC AGTCAGTTGA CGTCTGCACT GGCTGCGTTC
CAGAAGACAC TGGATACCCT TGCCAGTTCC ACCACGCCTG CCTTCCAGGG CTTTGCTGCT
ACGTCTTCTA ATGAAGCGGT GGTCAAGGCC ACAGCGGGCA ACACGGCAGT CAACGGCTCC
TACGCGATCA ACGTTAGCCA GCTGGCAACG CCTTCGAAGG TGGCTACCGC CGCGCTAGAC
TCGACGCAGT CAAGTGCTAT TCCGAGTGGT ACTCTGAAAA TCACTCAAAA TGGCACTGAT
TACAACGTGG CGATCGACAA GACCTCGACG CTGCAGGAAG TGCGCGACAA GGTCAACTCG
ACGCTGCAGG GTAAAGGCAT CACCGCCAAC ATCATCAACG ACAACAACGG TTCCAGGCTG
GTGTTCAGTT CGACGACCAC CGGCAAGGGC AGTGACATTT CGGTGACGGG CGCTTCCGGC
CAGGAAGCAC TTAACATCGA TGGCACCAAG TTGATGAGTG AATCCAGTAC CGGCGCTGGT
GCGATTACCG CTGTCGCCAA GGACGCCGCA TTCACGGTCG ATGGCCTGAG TCTGACCAGC
AAGACCAATA CCGTGAGTAC GGCCATTTCC GGTCTGACGT TCGAACTGGT CGCGCCCAGC
GCTTCTTCTG CTCCTTCGGC ATCGACCACA GTCACGGTAG CCACTAACAC CGATGGTCTG
AAAACGTCAT TGCAGTCTTT CGTCGACTCT TACAACACAC TGGTTTCACT GGTGTCGTCG
TTGACCAAGG GCACTGTCGA CAGTCAGGGT AAATACACGG CCGCTGCGTT GACCGGCGAT
TCCGCGCCGC GTGCCCTGCT GGCGACGATA CGCGACCAGA TTGCCACGGC TACGTCGAAT
GCCGGCTTGA GTTCCCTGGC GCAGTTGGGG ATCAAGACTC AACAGTCTGA CGGCAAATTG
ACGTTAAGCA CGACCGAACT CACAACAGCG CTGAGCGACA AGAAGCTGGG CAGCCAGATT
CAGGCGATGT TCACCGGTGT GACCAATGCT GACGGCACCA GCTCGGGTGG CTTGATCGCA
CGCATGAACA CTGCGCTTGA GCCGTATACG AAAGCCGACG GCGTTCTGGC TGGCAAGACC
ACCAGTCTTA ATAAAGTGCA GACGCGACTG GCCAGTGATC AGGAGGCGCT CAACCGTCGT
ATTACGACAT TGACGGCAAC CCTCACCAAG AAATATAACG CAATGGACCT GGTCGTCGGG
CAGTTAAAGG CAACGGCTTC AAGCATTACT TCGATTTTTG AAGCGATGAA CGCGCAGAAA
AACGCCTCGT AA
 
Protein sequence
MASPITSTNG IGSGLAIGSI VEGLVGAEKA PKQNQIDKQS ASTTASLSGV SQLTSALAAF 
QKTLDTLASS TTPAFQGFAA TSSNEAVVKA TAGNTAVNGS YAINVSQLAT PSKVATAALD
STQSSAIPSG TLKITQNGTD YNVAIDKTST LQEVRDKVNS TLQGKGITAN IINDNNGSRL
VFSSTTTGKG SDISVTGASG QEALNIDGTK LMSESSTGAG AITAVAKDAA FTVDGLSLTS
KTNTVSTAIS GLTFELVAPS ASSAPSASTT VTVATNTDGL KTSLQSFVDS YNTLVSLVSS
LTKGTVDSQG KYTAAALTGD SAPRALLATI RDQIATATSN AGLSSLAQLG IKTQQSDGKL
TLSTTELTTA LSDKKLGSQI QAMFTGVTNA DGTSSGGLIA RMNTALEPYT KADGVLAGKT
TSLNKVQTRL ASDQEALNRR ITTLTATLTK KYNAMDLVVG QLKATASSIT SIFEAMNAQK
NAS