Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3464 |
Symbol | |
ID | 3368991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4127689 |
End bp | 4129140 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637653815 |
Product | flagellar hook-associated protein 2, N-terminal:flagellar hook-associated 2, C-terminal:flagellin hook IN |
Protein accession | YP_236534 |
Protein GI | 66046693 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.538459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAGTC CGATTACATC TACAAATGGT ATTGGGTCCG GTTTGGCAAT CGGTTCCATC GTCGAAGGTC TTGTCGGTGC TGAAAAAGCG CCCAAGCAGA ACCAGATCGA CAAGCAGAGC GCCTCCACGA CTGCATCCCT GTCGGGTGTC AGTCAGTTGA CGTCTGCACT GGCTGCGTTC CAGAAGACAC TGGATACCCT TGCCAGTTCC ACCACGCCTG CCTTCCAGGG CTTTGCTGCT ACGTCTTCTA ATGAAGCGGT GGTCAAGGCC ACAGCGGGCA ACACGGCAGT CAACGGCTCC TACGCGATCA ACGTTAGCCA GCTGGCAACG CCTTCGAAGG TGGCTACCGC CGCGCTAGAC TCGACGCAGT CAAGTGCTAT TCCGAGTGGT ACTCTGAAAA TCACTCAAAA TGGCACTGAT TACAACGTGG CGATCGACAA GACCTCGACG CTGCAGGAAG TGCGCGACAA GGTCAACTCG ACGCTGCAGG GTAAAGGCAT CACCGCCAAC ATCATCAACG ACAACAACGG TTCCAGGCTG GTGTTCAGTT CGACGACCAC CGGCAAGGGC AGTGACATTT CGGTGACGGG CGCTTCCGGC CAGGAAGCAC TTAACATCGA TGGCACCAAG TTGATGAGTG AATCCAGTAC CGGCGCTGGT GCGATTACCG CTGTCGCCAA GGACGCCGCA TTCACGGTCG ATGGCCTGAG TCTGACCAGC AAGACCAATA CCGTGAGTAC GGCCATTTCC GGTCTGACGT TCGAACTGGT CGCGCCCAGC GCTTCTTCTG CTCCTTCGGC ATCGACCACA GTCACGGTAG CCACTAACAC CGATGGTCTG AAAACGTCAT TGCAGTCTTT CGTCGACTCT TACAACACAC TGGTTTCACT GGTGTCGTCG TTGACCAAGG GCACTGTCGA CAGTCAGGGT AAATACACGG CCGCTGCGTT GACCGGCGAT TCCGCGCCGC GTGCCCTGCT GGCGACGATA CGCGACCAGA TTGCCACGGC TACGTCGAAT GCCGGCTTGA GTTCCCTGGC GCAGTTGGGG ATCAAGACTC AACAGTCTGA CGGCAAATTG ACGTTAAGCA CGACCGAACT CACAACAGCG CTGAGCGACA AGAAGCTGGG CAGCCAGATT CAGGCGATGT TCACCGGTGT GACCAATGCT GACGGCACCA GCTCGGGTGG CTTGATCGCA CGCATGAACA CTGCGCTTGA GCCGTATACG AAAGCCGACG GCGTTCTGGC TGGCAAGACC ACCAGTCTTA ATAAAGTGCA GACGCGACTG GCCAGTGATC AGGAGGCGCT CAACCGTCGT ATTACGACAT TGACGGCAAC CCTCACCAAG AAATATAACG CAATGGACCT GGTCGTCGGG CAGTTAAAGG CAACGGCTTC AAGCATTACT TCGATTTTTG AAGCGATGAA CGCGCAGAAA AACGCCTCGT AA
|
Protein sequence | MASPITSTNG IGSGLAIGSI VEGLVGAEKA PKQNQIDKQS ASTTASLSGV SQLTSALAAF QKTLDTLASS TTPAFQGFAA TSSNEAVVKA TAGNTAVNGS YAINVSQLAT PSKVATAALD STQSSAIPSG TLKITQNGTD YNVAIDKTST LQEVRDKVNS TLQGKGITAN IINDNNGSRL VFSSTTTGKG SDISVTGASG QEALNIDGTK LMSESSTGAG AITAVAKDAA FTVDGLSLTS KTNTVSTAIS GLTFELVAPS ASSAPSASTT VTVATNTDGL KTSLQSFVDS YNTLVSLVSS LTKGTVDSQG KYTAAALTGD SAPRALLATI RDQIATATSN AGLSSLAQLG IKTQQSDGKL TLSTTELTTA LSDKKLGSQI QAMFTGVTNA DGTSSGGLIA RMNTALEPYT KADGVLAGKT TSLNKVQTRL ASDQEALNRR ITTLTATLTK KYNAMDLVVG QLKATASSIT SIFEAMNAQK NAS
|
| |