| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3457 |
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| Symbol | fliF |
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| ID | 3368984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4120078 |
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| End bp | 4121862 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637653808 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_236527 |
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| Protein GI | 66046686 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAG CAGCTGCCGA TACCGTTCCT GCAAGAACGG GCGATTCCGA AAGAAAACCG
TTGTTCGGTA TGTCTTTTCT GGAAAATCTT TCCGAAATGA CCATGCTGCG TCAGATCGGC
CTCATGGTCG GTCTTGCCGC GAGCGTGGCC ATCGGCTTCG CCGTGGTGCT CTGGTCCCAG
CAGCCTGACT ATCGTCCGCT TTATGGCAGT CTGGCGGGCA TGGACAGCAA GCAGATCATG
GACACCCTGA CTGCGGCGAA CATCAACTAC ACCGTTGAGC CGAACTCCGG TGCGCTGCTG
GTCAAGTCCG ATGATGTGCA GCGTGCGCGT ATCCAACTGG CCCAGGCGGG TGTGGTACAG
AACGACGCCA ACATCGGTTT CGAAATCCTT GACAAGGATC AGGGCCTTGG CACCAGTCAG
TTCATGGAAG CCACACGCTA TCGTCGTGGC CTGGAAGGTG AACTGGCACG TACCATTTCT
GCATTGAACA ACGTCAAGGG TGCCCGTGTG CACCTGGCCA TTCCGAAGAG CTCGGTGTTC
GTCCGTGATG ACCGCAAGCC AAGTGCATCG GTACTGGTCG AGCTGTACGC CGGTCGTTCA
CTGGAGCCGA GTCAGGTCAT GGCCATCATC AATCTGGTGG CCACCAGTGT TCCCGAGCTG
AGCAAGTCGC AGATTACCGT CGTCGACCAG AAGGGCGCTC TGCTTTCCGA TCAGGCGGAA
AACTCCGAAC TGACCATGGC CGGCAAGCAA TTCGACTACA GCCGTCGCAT GGAAGGCATG
CTGACCCAGC GCGTGCAGAA CATTCTGCAG CCGATTCTGG GCAATGATCG CTACAAGGCC
GAGGTCTCGG CAGTGGTTGA TTTCAGCGCT GTCGAATCGA CCGCCGAAAG CTTCAACCCC
GACCAGCCTG CCTTGCGCAG CGAGCAGTCG GTCAATGAAC AACGTTCCAG CAGCTCAAGC
TCGGGCGGCG TTCCGGGTGC GCTGAGCAAC CAGCCGCCCG GCCCGGCGAC GGCTCCGCAG
ACTGCAGGCG GTGGTGCCGC CGGTGCTGCC GGCCCCATCG CGCCAGGCCA GCCACTGCTG
GATGCCAATG GTCAGCAGAT CATGGACCCG GCCACCGGTC AGCCCGCGTT GGCGCCATAC
CCTGCCGACA AGCGCGTGCA GTCGACCAAG AACTTCGAGC TGGACCGTTC GATCAGTCAC
ACCAAGCAGC AGCAGGGCCG TCTGACCCGC CTGTCGGTCG CGGTGGTGGT CGACGACATG
GTCAAGACCA ACGCGGCCAA TGGCGAAGTG ACGCGTGCTC CGTGGAGCGC GGCGGATCTG
GCTCGTTTCA CGCGTCTGGT ACAGGATGCC GTGGGTTTCG ACGCCAGCCG CGGTGACAGC
GTCAGCGTGA TCAACGTGCC ATTCTCCAGC GAACGCGCTG AAGTGCTGCC TGAGGCGTCG
TTCTATTCGC AACCCTGGTT CTGGGACATC GTCAAGCAGG CGGTTGGCGT GATTTTCATC
CTGATCCTGG TGTTTGGTGT ACTGCGCCCG GTGTTGAACA ACATCACCAA CGGCAAGCGC
AAGGAACTGG CAGGTTTCGG TGGCGACGCC GAACTGGGTG GCATGGGCGG TCTGGACGGC
GAATTGTCCA ACGATCGCGT AAGCCTGGGC GGCCCGCAGA GTATTCTGCT GCCGAGCCCG
ACCGAAGGCT ATGACGCACA GCTGAACGCA ATCAAGAGTT TGGTGGCTGA GGATCCTGGC
CGTGTGGCTC AGGTTGTGAA AGAGTGGATC AACACTGATG AATGA
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| Protein sequence | MAEAAADTVP ARTGDSERKP LFGMSFLENL SEMTMLRQIG LMVGLAASVA IGFAVVLWSQ
QPDYRPLYGS LAGMDSKQIM DTLTAANINY TVEPNSGALL VKSDDVQRAR IQLAQAGVVQ
NDANIGFEIL DKDQGLGTSQ FMEATRYRRG LEGELARTIS ALNNVKGARV HLAIPKSSVF
VRDDRKPSAS VLVELYAGRS LEPSQVMAII NLVATSVPEL SKSQITVVDQ KGALLSDQAE
NSELTMAGKQ FDYSRRMEGM LTQRVQNILQ PILGNDRYKA EVSAVVDFSA VESTAESFNP
DQPALRSEQS VNEQRSSSSS SGGVPGALSN QPPGPATAPQ TAGGGAAGAA GPIAPGQPLL
DANGQQIMDP ATGQPALAPY PADKRVQSTK NFELDRSISH TKQQQGRLTR LSVAVVVDDM
VKTNAANGEV TRAPWSAADL ARFTRLVQDA VGFDASRGDS VSVINVPFSS ERAEVLPEAS
FYSQPWFWDI VKQAVGVIFI LILVFGVLRP VLNNITNGKR KELAGFGGDA ELGGMGGLDG
ELSNDRVSLG GPQSILLPSP TEGYDAQLNA IKSLVAEDPG RVAQVVKEWI NTDE
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