Gene Psyr_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3454 
SymbolfliI 
ID3368981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4116887 
End bp4118245 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content63% 
IMG OID637653805 
Productflagellum-specific ATP synthase 
Protein accessionYP_236524 
Protein GI66046683 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTG ATCGCACCAG TTTCGCCAAG CGCCTCGGTT CCTATGCCGA GTCGATCAGC 
CTGCCTGCCC AGCCCGTAGT GGAAGGTCGG CTGCTGCGCA TGGTGGGTCT GACGCTTGAG
GCCGAGGGCC TGCGCGCGGC AATGGGCAGC CGGTGTGTGG TTATCAATGA CGACAGCCAT
CACCCGGTGG AAGTCGAAGC TGAAGTGATG GGTTTTTCCG GTGGCAAGGT GTTTCTCATG
CCGGTCGGCA GCGTGGCCGG CATCGCGCCT GGCGCGCGGG TTGTGCCGCT GGCCGATACC
GGTCGTCTGC CGATGGGCAT GAGCATGCTG GGCCGGGTGC TTGATGGTGC CGGTCGTCCG
CTGGATGGTC GCTCGCCGAT CAAGGCTGAA GACTGGGTGC CGATGGATGG CCCGACCATC
AACCCGCTCA AGCGTGACCC CATCAGTCAG CCACTGGATG TCGGCATTCG GTGCATCAAC
GGTTTATTGA CGGTGGGTCG CGGTCAGCGT CTCGGGCTGT TTGCCGGTAC GGGCGTGGGC
AAGAGTGTGC TGCTCGGCAT GATGACGCGC TTCACCGAAG CGGACATCAT CGTCGTCGGC
CTGATCGGGG AGCGGGGCCG TGAGGTCAAG GAGTTCATCG AGCACATCCT CGGCGAGGAG
GGCCTGAAGC GTTCGGTGGT GGTCGCTTCG CCAGCCGATG ATGCGCCTCT GATGCGTTTG
CGCGCAGCGA TGTATTGCAC GCGAATCGCC GAATACTTTC GTGACAAGGG CAAGAATGTC
CTGTTGCTGA TGGATTCCCT GACCCGTTTT GCTCAGGCTC AGCGGGAAAT CGCGCTGGCC
ATTGGCGAGC CGCCGGCCAC CAAGGGCTAT CCTCCATCAG TGTTTGCCCG CTTGCCCAAA
CTGGTCGAGC GCGCCGGCAA CGCTGAAAAG GGCGGTGGTT CTATTACCGC GTTTTACACC
GTGCTCTCCG AAGGCGATGA CCAGCAGGAC CCGATTGCCG ACTCGGCGCG CGGTGTGCTG
GACGGTCACA TCGTGTTGTC CCGGCGTCTG GCCGAAGAGG GGCATTACCC GGCTATCGAT
ATCGAAGCGT CGATCAGCCG GGTCATGCCC GCCGTGGTCA GCCCCGAACA CATGGCGCGT
GCGCAGCATT TCAAACAGTT GTGGTCGCGT TATCAGCAGA CGCGCGATCT GATCAGCGTC
GGCGCCTACG TGGCCGGTGG TGATCGCGAG ACGGACATGG CGATCGCGCT GCATCCGGTA
CTGGTGCGCT ATCAGCGTCA GGCGTTGCGC GAGAACGAAA GCATGCAGGG CAGCAGCGAG
GCGCTGGCGT CGATCTTCGC ACCAGCGCCT GGCGGCTGA
 
Protein sequence
MRLDRTSFAK RLGSYAESIS LPAQPVVEGR LLRMVGLTLE AEGLRAAMGS RCVVINDDSH 
HPVEVEAEVM GFSGGKVFLM PVGSVAGIAP GARVVPLADT GRLPMGMSML GRVLDGAGRP
LDGRSPIKAE DWVPMDGPTI NPLKRDPISQ PLDVGIRCIN GLLTVGRGQR LGLFAGTGVG
KSVLLGMMTR FTEADIIVVG LIGERGREVK EFIEHILGEE GLKRSVVVAS PADDAPLMRL
RAAMYCTRIA EYFRDKGKNV LLLMDSLTRF AQAQREIALA IGEPPATKGY PPSVFARLPK
LVERAGNAEK GGGSITAFYT VLSEGDDQQD PIADSARGVL DGHIVLSRRL AEEGHYPAID
IEASISRVMP AVVSPEHMAR AQHFKQLWSR YQQTRDLISV GAYVAGGDRE TDMAIALHPV
LVRYQRQALR ENESMQGSSE ALASIFAPAP GG